Gene P9301_05001 details

Gene Information

• Locus tag: P9301_05001
• Symbol: rplS
• ID: 4912457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 436257
• End bp: 436736
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640160080
• Product: 50S ribosomal protein L19
• Protein accession: YP_001090724
• Protein GI: 126695838
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0335] Ribosomal protein L19
• TIGRFAM ID: [TIGR01024] ribosomal protein L19, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.112658
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAA TGGCCAAAGA GAAACAAGAG AAGGATTTAG AAACCGGTAT TAAAGCTGGA 
GCATCAGTTG ATGTGGCAGT TGAACAAAAA GAAAAAAATA CGGTTTCTGA GACTACGCAA 
ACCTTAAGCG CATCCAATCT TATTAAGGAA TTTGAGAACG AACAATTAAA AAAAGAATTA 
CCTGAAATTT ATGTTGGGGA CACTGTTAAA GTTGGTGTGA AAATTACAGA AGGTAATAAA 
GAAAGAGTCC AACCTTATGA AGGCGTTGTC ATAGCAAAAA GACATGGAGG AATTAACCAG 
ACTATTACAG TTAGAAGAAT TTTTCAGGGT ATAGGTGTTG AAAGAGTATT TATGCTACAT 
AGTCCACAGG TTGCCTCTCT AAAAGTTGAA CGTAGAGGTA AAGTAAGAAG AGCTAAGTTA 
TTCTATCTGA GAGATAGAGT AGGAAAAGCT ACTCGCGTAA AACAACGCTT TGATCGATAA 

 

Protein sequence

MTKMAKEKQE KDLETGIKAG ASVDVAVEQK EKNTVSETTQ TLSASNLIKE FENEQLKKEL 
PEIYVGDTVK VGVKITEGNK ERVQPYEGVV IAKRHGGINQ TITVRRIFQG IGVERVFMLH 
SPQVASLKVE RRGKVRRAKL FYLRDRVGKA TRVKQRFDR