Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_02111 |
Symbol | spoT |
ID | 4912087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 193714 |
End bp | 196023 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640159777 |
Product | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase |
Protein accession | YP_001090435 |
Protein GI | 126695549 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGAGG CAGCTGCAAA TTCAAAAGAA AAAAACGAAA TTGAAGTTTC CAAAACTATT TTGCCTGAAA ATAAAAAATA TGAAAGTGAA TCTTTGAATT ATCAAATAAA CATTCCCGAT TGGCTTCTTA AAGATATTCA TAATTTTGAA AAATCAAATA AAGAAAATGA TGAAAATCAA AACCTTATAG TAAAGGCTTT TAAACTTGCT TATAAAGCTC ATGATGGACA ATTCCGCGCG AGCGGCGAGC CATACATTAT CCACCCGGTT GCTGTTGCAA ATCTCCTTAA AGAAATAGGT GCTAGTTCAT CTGTTATTGC TGCAGGCCTT TTACATGATG TAGTTGAAGA TACTGGCATT GATTTATCCG AAATAGAAAC AAATTTTGGA TTAGAAGTAA AAATACTTGT AGAGGGTGTA ACAAAATTAG GCGGCATTCA CTTTAACAAC AGGACTGAAG CACAAGCTGA AAATCTTAGG AAAATGTTTT TGGCTATGGC CAGCGATATC AGAGTTGTTT TAGTAAAACT TGCAGATCGA CTTCATAACA TGAGAACAAT TGAATGGCTA AATGATGAGA AAAAACTAAG AATAGCGAGA GAAACAAGAG AGATTTATGC GCCATTAGCA AATCGACTAG GAATAAACAG ATTTAAATGG GAATTAGAAG ATTTAGCTTT TAAATTCCTA GAACCGAAAG AATATCTAGA TCTTAAAGAT CAAATCGCCG TTAAAAGAAG TGATAGAGAA AAAAGATTAA AAGTAACTTT GAATCTTATG AAGGAAAACT TGATTTCAGC AGGTTTGAAA AATTTTGAAA TAACAGGAAG GCCAAAACAT CTTTATGGCA TCTGGAGCAA AATGGAAAGA CAGCAAAAGC ATTTTCACGA GATTTATGAT GTTGCTGCCC TAAGAATTAT CGTGGACAAT TCAGATAGTT GTTATAGAGC TTTAGCAGTT GTTCATGATA CTTTTAAACC AATTCCAGGT AGATTTAAAG ACTATATAGG ATTACCAAAG CCCAATGGAT ATCAGTCCTT ACACACTTCT GTGATTGGAA GACATCGACC TATTGAAGTT CAAATTAGAA CTACTTCAAT GCATCAAATT GCTGAATATG GTATTGCCGC TCATTGGCAA TACAAAGAGG GTGGTTCTCC TGCTAAAAGT AATGCCGAGA GATTTAATTG GCTAAGACAA TTAGTAGAAT GGCAACAAGA AGGCAATGAA AGGGATCATA ATGATTACCT AGCTTCAATA AAAGAAGATT TATTTGATGA AGAAGTATTT GTGATCACTC CAAAAGGAGA TGTTGTTGGT TTAAGGAAAG GATCTACCGC GATAGATTTC GCCTACAGAA TTCATTCTGA AGTTGGAAAT CACTGTAATG GAATAAGAAT TAATGAAAAG CTTTCTCCAT TATCTACAGC ACTTCAAAAT GGTGACTTCA TAGAAATTTT AACAAGTAAT AATTCTACTC CAAGCTTGGA TTGGCTGAAC TTTGTAGTAA CGCCAACTGC TAAAAATAGA ATTCGCCAAT GGTATAAGAA AAGCCATCGT GATGAAACGA TTAAAAGAGG TAGAGATTTA CTTGAAAAAG AAGTAGGTAA AAACGGTTTT GAAGCATTAC TTTCTAGTGA AGCCATGAAA AAAGTTGCAA ATCGATGCAA TTTAAAAACT ACTGAAGACC TTCTTGCATC TCTTGGTTTT GGTGGTTTAA CTTTGCATCA AGTATTAAAC AGACTAAGAG AAGAAATAAA ATTACAGACA GAAGATGTAA AAAATGATTC TGACTCTGAA ATAGCAAAAT CTCTTAAAAG TAATAATAAT TTATCCACTA ATCAACCTAA TACAGCAGCT AAATCACCAA TTTCCGGGAT AGAAGGTCTT GATTACAGAA TAGGTAAATG CTGTTCCCCA CTCCCAGGCG AGGATATTAT CGGAACTGTG TCGCTCGGCA ACCATGGGAT AACTATACAT AGGGAAGATT GTGAAAATGT AATACCAATT CCAATAGAGA GAAGATTACC TGTCGGTTGG AATCAAGATA ATAAAACTGG CGATAATAAG TTTCCAATTC AGCTACGAAT AGAAGTAATT GATCGAGTTG GAGTTCTTAA AGATATTCTT ATGCGGTTAT CTGATAAAGG TATAAACGTT AGCGATGCCA ATGTTAAAAC TGCTTATGGT AAACCAGCTA TTATAAATCT TTGTGTAGGT CTTGAAAGTT ATAATCAACT TCACAAAACA ATTGAACAAA TTAAATCAAT GGCAGATGTT TTAGATATTG CCAGAGTTGG ACAAAGTTAA
|
Protein sequence | MSEAAANSKE KNEIEVSKTI LPENKKYESE SLNYQINIPD WLLKDIHNFE KSNKENDENQ NLIVKAFKLA YKAHDGQFRA SGEPYIIHPV AVANLLKEIG ASSSVIAAGL LHDVVEDTGI DLSEIETNFG LEVKILVEGV TKLGGIHFNN RTEAQAENLR KMFLAMASDI RVVLVKLADR LHNMRTIEWL NDEKKLRIAR ETREIYAPLA NRLGINRFKW ELEDLAFKFL EPKEYLDLKD QIAVKRSDRE KRLKVTLNLM KENLISAGLK NFEITGRPKH LYGIWSKMER QQKHFHEIYD VAALRIIVDN SDSCYRALAV VHDTFKPIPG RFKDYIGLPK PNGYQSLHTS VIGRHRPIEV QIRTTSMHQI AEYGIAAHWQ YKEGGSPAKS NAERFNWLRQ LVEWQQEGNE RDHNDYLASI KEDLFDEEVF VITPKGDVVG LRKGSTAIDF AYRIHSEVGN HCNGIRINEK LSPLSTALQN GDFIEILTSN NSTPSLDWLN FVVTPTAKNR IRQWYKKSHR DETIKRGRDL LEKEVGKNGF EALLSSEAMK KVANRCNLKT TEDLLASLGF GGLTLHQVLN RLREEIKLQT EDVKNDSDSE IAKSLKSNNN LSTNQPNTAA KSPISGIEGL DYRIGKCCSP LPGEDIIGTV SLGNHGITIH REDCENVIPI PIERRLPVGW NQDNKTGDNK FPIQLRIEVI DRVGVLKDIL MRLSDKGINV SDANVKTAYG KPAIINLCVG LESYNQLHKT IEQIKSMADV LDIARVGQS
|
| |