Gene P9301_01231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_01231 
SymbolaroK 
ID4911060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp120690 
End bp121247 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content30% 
IMG OID640159688 
Productshikimate kinase 
Protein accessionYP_001090347 
Protein GI126695461 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAT CCATTATCGA AAAAACAGTT CATACCATCA AGGGCAGAAG CATATTTTTA 
ATAGGAATGA TGGGTTCTGG CAAGTCACAA ACTGGTTTGA AGCTGGCTGA ATTATTGAAG
TATAAATACA TTGATTTAGA TACATTAATA GAGAAGTTGG CAAAAAAATC TATCAATCAA
ATTTTCAATG ATGAAGGAGA AGATAATTTC CGTGAATTAG AAGCAAACTG TCTTAAAGAA
ACTATCAAAA TTCCTTCATT AGTAATCTCA ACTGGGGGAG GAATAGTTAC CAAATCGGAA
AACTGGGGAA TCTTAAGACA GGGAATAATT GCTTGGATAG ATCTCGACAA AGATATAGCA
ATTGAAAGAT TGAAAAATGA AATTAAAAAT AGGCCACTTC TTCAGGGAAA GAATCTAAAT
GATCTATATA TGAGCATTTT TCAATCTAGA GAAAATTTGT ATTCTCAAGC AGATTTAAGA
ATTCAAGTAA AAAAAGAAAA TATTGAAGAA GTTGCTTTGA AAATAATTAA TGCAATTAAT
AAAGAAATAA TTAGTTAA
 
Protein sequence
MEQSIIEKTV HTIKGRSIFL IGMMGSGKSQ TGLKLAELLK YKYIDLDTLI EKLAKKSINQ 
IFNDEGEDNF RELEANCLKE TIKIPSLVIS TGGGIVTKSE NWGILRQGII AWIDLDKDIA
IERLKNEIKN RPLLQGKNLN DLYMSIFQSR ENLYSQADLR IQVKKENIEE VALKIINAIN
KEIIS