Gene P9301_00791 details

Gene Information

• Locus tag: P9301_00791
• Symbol: def
• ID: 4911246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 81806
• End bp: 82411
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640159644
• Product: peptide deformylase
• Protein accession: YP_001090303
• Protein GI: 126695417
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.503942
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAACC ATTTTTCACA ACTTGCAAAA AAGTCAAGAA CAAATGGAAA CGCAGAAAAA 
ATTGCAAAAG AACAACCAGG TAAGCCGTCT CTAGACATTT ATAAACTTGG TGATGATGTA 
TTAAGACAAA ATTCCAAAAG AATAACTAAA GTTGACGAAT CGATTAGAAA ACTTGCTAGA 
GAAATGCTTC AAAGCATGTA TGCAGCTAAA GGAATTGGAC TTGCTGCACC TCAAATTGGA 
ATCAACAAAG AGCTTCTTGT CATAGACGTA AATTTTGAAG ATTCAGCAGC AGAACCTTTA 
ATATTAATCA ATCCAGAAAT TACAGACTTT GGAACAACCC TTAATTCATA TGAAGAAGGC 
TGCTTGAGTA TACCTGGCGT CTATTTGAAT GTAGTAAGAC CATCAACTAT AAAATTAAAA 
TTTAGAGATG AAATGGGACG GCCACGTAAA ATGAAAGCAG ATGGACTTTT AGCGAGGTGT 
ATTCAACACG AAATGGATCA CTTAAACGGA ATATTATTTG TAGATAGAGT TACATCAAAA 
GATGATTTGA ACAAAGAACT TTTAAAAGAA GGATTTAACG AAAAAGACGT TATCTCAATT 
AATTAA 

 

Protein sequence

MANHFSQLAK KSRTNGNAEK IAKEQPGKPS LDIYKLGDDV LRQNSKRITK VDESIRKLAR 
EMLQSMYAAK GIGLAAPQIG INKELLVIDV NFEDSAAEPL ILINPEITDF GTTLNSYEEG 
CLSIPGVYLN VVRPSTIKLK FRDEMGRPRK MKADGLLARC IQHEMDHLNG ILFVDRVTSK 
DDLNKELLKE GFNEKDVISI N