Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_00791 |
Symbol | def |
ID | 4911246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 81806 |
End bp | 82411 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640159644 |
Product | peptide deformylase |
Protein accession | YP_001090303 |
Protein GI | 126695417 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.503942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAACC ATTTTTCACA ACTTGCAAAA AAGTCAAGAA CAAATGGAAA CGCAGAAAAA ATTGCAAAAG AACAACCAGG TAAGCCGTCT CTAGACATTT ATAAACTTGG TGATGATGTA TTAAGACAAA ATTCCAAAAG AATAACTAAA GTTGACGAAT CGATTAGAAA ACTTGCTAGA GAAATGCTTC AAAGCATGTA TGCAGCTAAA GGAATTGGAC TTGCTGCACC TCAAATTGGA ATCAACAAAG AGCTTCTTGT CATAGACGTA AATTTTGAAG ATTCAGCAGC AGAACCTTTA ATATTAATCA ATCCAGAAAT TACAGACTTT GGAACAACCC TTAATTCATA TGAAGAAGGC TGCTTGAGTA TACCTGGCGT CTATTTGAAT GTAGTAAGAC CATCAACTAT AAAATTAAAA TTTAGAGATG AAATGGGACG GCCACGTAAA ATGAAAGCAG ATGGACTTTT AGCGAGGTGT ATTCAACACG AAATGGATCA CTTAAACGGA ATATTATTTG TAGATAGAGT TACATCAAAA GATGATTTGA ACAAAGAACT TTTAAAAGAA GGATTTAACG AAAAAGACGT TATCTCAATT AATTAA
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Protein sequence | MANHFSQLAK KSRTNGNAEK IAKEQPGKPS LDIYKLGDDV LRQNSKRITK VDESIRKLAR EMLQSMYAAK GIGLAAPQIG INKELLVIDV NFEDSAAEPL ILINPEITDF GTTLNSYEEG CLSIPGVYLN VVRPSTIKLK FRDEMGRPRK MKADGLLARC IQHEMDHLNG ILFVDRVTSK DDLNKELLKE GFNEKDVISI N
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