| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_00681 |
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| Symbol | smc |
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| ID | 4911543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 69528 |
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| End bp | 73118 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640159632 |
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| Product | SMC ATPase superfamily chromosome segregation protein |
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| Protein accession | YP_001090292 |
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| Protein GI | 126695406 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGATTGG TACATATCAA TCAGGTCGAG TTTGAAAATT TTAAATCTTT TGGGGGAAAT
GTAAAAATTC CTCTTGAAGA AGGTTTTACG GTGGTTACGG GTCCTAACGG TTCTGGAAAA
AGTAATATTT TAGATGGAAT TTTATTCTGT TTAGGTTTAT CCAATAGTAG AGGGATGAGG
GCTGAAAGAT TACCAGATCT AATAAATAAC TCCAAAGTTA AAGAGGGTAA GTCATCAGAA
ACATCTGTAT CGGTAAAATT TAATATTCAA GATTGGTTTC CCAGAGAAGA TCTTCCGCCT
TTGGAACTAG AAGAAGAAGA AATTGGCCTT AATAAAGGTC AAAAAGAATG GGTAGTTTCT
AGAAAATTAA GGCTTATGCC AGGGGGTTCT TATGCTTCTA CTTATACGTC TGATGGAAAA
CAATGTACCT TGCAACAAAT ACAGAGAATA TTAAGAGATA TTAGTGTTGA TCCTGAGGGC
AGCAATGTTG TTATGCAGGG TGATGTAACA AGAATAGTAT CAATGAATAA TAAGGAGCGG
AGAAATCTTA TTGATGAATT AGCAGGAGTC GCACTTTTTG ATACAAGAAT AGAACAAACT
AATGCAAAAT TAAATGACGT TTTTGAAAGA CAAGAAAGAT GTGAAATTTT AGAAAATGAA
TTGCAATCTA GTAAGAATAA GCTTGAAAAA GAATGTGAAA AAGCAAAGCG ATATAAAGAG
TTAAAGGCAA AACTACAACA AATAATGGAA TTAGAGAAAG TTCTTATTTT TGAAAAACAA
GTTAAGCATG TTGAATCTAT AGAAAAAAAA GAAAGTGAAA TTGAAAAAAA TAAAATCTTA
TTTAATAAAC AAAAAGCATC TATTAGTAAT GAAATATCAG TTTTAGAAGA TGCTTTGAAA
ATACTAGTTG ATGAGCTGAA GGAGAAAGGA GAGGATACTT TAATAAAAGT TAATTCTGAT
ATTGGAAGTA TTAACTCTAA CTTGAGAGAA CTTGATAGGA TATCAATTCT GAATAAAGAA
GAAGGTATTA AATTACAAAA ACAGAGAGAT GAAATTTCAA TTTCTAAGAG GAATATTGAG
TCAGAAAAGA TTAGACAAGA AAATTTCGAT GATAATTTTT TAAATCAATT GAACTTGCAA
ATTGATGATC TCACTTTAAA ACACAAATTA TCCAGAAAAA AACTTTCTGA TGCGGCTGGA
GAATCTGGAG AATTCTCAAA ACAAAGTATC AAATTAAATG CTGAGCTTGA AAGTATAAAA
AATCAAATTA ATCCTTTGGA AATAAAAAAA AGGAAAATTG AAGAAGAGAC TATTCAAAAT
AATATTCAAA AGGATGAGAT ATTGTCACAG ATCGAATCCT TAGACTTAGA AGAGCAGAAA
ATTTTTAAGG GAAATCAAAG AAAAAAAGAG ACATCCGATA CAAAGAATAA AAATTTAGCA
AGTAATAGCG CAGAAATTAA TTCTTTAAAA AATGAAATCG ATTTATTAAT TAAAACTAAA
TCAAGGCTAA ATAACGAGCA ATTAAGGCTT GAAAAAGATT TATCTAGATT CGAAAGCAGG
AAAGAAGCTT TAAACGAATC TAGAGGTTCA TATGCTCTCA GAATTCTTTT AGAGGCAGGG
TTAGAAGGTA TACATGGTTA TGTAGCTCAA CTTGGAGAGG TCAGTGAGAA AAATAGATAT
GCATTAGAAA TTGCTGCTGG AAATAGGTTA GGACAAATTG TTGTTGATAA TGATCATATT
GCTGCAAAAG CAATTGAAAT TCTTAAAAAG AAGAAAGCGG GAAGATTAAC TTTTTTACCT
TTAAATAGAA TTAAAAGTCA AAAAAAGAAT TATGTAATTT CAAGATTTGA AAATCATAGG
GAGAATGGAT TTATTGATAA AGCTATTAAT CTAATTACTT TTGATGAAGT TTATTCAGAT
GTTTTTCGAT ATGTTTTTGG AGATACTTTG GTTTTTTCAG ACTTATCCTC AGCTAGGTTA
TCTACACAAA AAAATAGGTT GGTTACCTTA AGTGGTGAAT TATTAGAAGC AAGTGGTGCT
ATTACAGGAG GCAGTAAGTT AAATAAAGAT TTGGCTTATA GGTTTGGAAC TAATAATGAA
ATTGATGATT CCAGTCCTAT AAAAGAAAGA TTATTAGTTA TCGAAGAAGC TTTAAAAGAG
TCAAATAATG ATTTGATACT AAAAAATAAT AGACTTAATA CATTAAATTC TAACCGCAGT
CAAATAATTG AGGATTGTGC CTCATTTAAT AAAGAAATTG AAGTAAATCA AGATTCACTT
AAAGCTGTCT CGCAAAGAAT TGAGGATTGT AAATCGAGAT TAAAAAAACT TGATATTGCT
AATAATTTAT TAGTTAACGA GTTAGGGCAT TTAAAAAATC AATTGAAGCC TTATTACGAT
AAGTTTGATC AACTACAAAC CATTCAAAAG GCAAATTATG AAAAAAATCA AAAATCATCA
TTAATAGCTT TTAATGACGA TTTTAATAAT CTTGATAAAA AACTTGAATT ACTTATTAAA
GAGAGAAATA CATTACTAGA TAAAAAGAAT CAATTTGCTT TAAATAAAGA GCGTATCAAT
AATTCATTAA AAATTACTCT ACTACAAGAA AAAAACTTGC AGGAATCTAT TAAACAACTC
GCAACTGCTC ATAGTGAATG GCTAGAAAAA AGAGATCAAT TTAAAAAAGA ACTTTCAGAT
CTTGATAATC AAAAAAATTC TCTAGAGAAG AATTTAGGTT TATTGAGAAG GAAAAGAGAT
GAATTAAACT CTTCAATTTC AAATAAAAGG CAAGAATATA ATAACTATCT GTTAAAGCTT
GAATATCTTG AAAGGGATAT GCATACCCTT AAAGAAGAGA TGAGGAGCGA GAAAATAAAA
TTAGAAAATT ATAAAAGAGA TCTACCTAAT CCTTCCCCGG AGTTTGGAGA ATATGAAGGG
AAGAGTCTTG AATCTTTGCA ATCAGAAATT TCGATTATAA ATGCAAAATT AGAAAGCTTA
GAACCTGTCA ATATGTTGGC TCTTGATGAA TTAGAAGAAT TAATTGAGAG ATTAAATGGT
TTGCGAGAAA AATTAGAAAT TCTATCTAAT GAAAGATCTG AATTATTGTT GAGAATAGAA
ACTGTATCTA CGATGCGTCA AGAAGCTTTT ATGCAAGCAT TTACAGAAGT TGATAGACAT
TTTAGAGAAA TTTTTGCAAA TTTATCTGAT GGAGATGGAT TTCTTCAACT TGAAAATCCT
AATTCTCCTT TAGAAGGAGG ATTAACTTTA GTGGCTCATC CCAAGGGAAA AAATGTCAGA
AGATTAGCGT CAATGTCTGG TGGTGAAAAA TCGTTAACTG CTTTAAGTTT TTTATTTGCT
TTGCAAAAGT ATAAGCCTTC ACCTTTTTAT GCATTAGACG AGGTTGATAG TTTTTTAGAT
GGTATTAATG TTGAAAGGTT GTCAAAATTA ATATCAAATC AGTCCTCAAA TGCTCAATTT
ATAGTCGTAA GTCATAGAAG GCCTATGATT AGTGCATCTG AACGAACAAT TGGGGTTGCG
CAAGCAAGAG GTGCTAATAC TCAAGTTCTT GGGTTACCAA ATGCTGCATA A
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| Protein sequence | MRLVHINQVE FENFKSFGGN VKIPLEEGFT VVTGPNGSGK SNILDGILFC LGLSNSRGMR
AERLPDLINN SKVKEGKSSE TSVSVKFNIQ DWFPREDLPP LELEEEEIGL NKGQKEWVVS
RKLRLMPGGS YASTYTSDGK QCTLQQIQRI LRDISVDPEG SNVVMQGDVT RIVSMNNKER
RNLIDELAGV ALFDTRIEQT NAKLNDVFER QERCEILENE LQSSKNKLEK ECEKAKRYKE
LKAKLQQIME LEKVLIFEKQ VKHVESIEKK ESEIEKNKIL FNKQKASISN EISVLEDALK
ILVDELKEKG EDTLIKVNSD IGSINSNLRE LDRISILNKE EGIKLQKQRD EISISKRNIE
SEKIRQENFD DNFLNQLNLQ IDDLTLKHKL SRKKLSDAAG ESGEFSKQSI KLNAELESIK
NQINPLEIKK RKIEEETIQN NIQKDEILSQ IESLDLEEQK IFKGNQRKKE TSDTKNKNLA
SNSAEINSLK NEIDLLIKTK SRLNNEQLRL EKDLSRFESR KEALNESRGS YALRILLEAG
LEGIHGYVAQ LGEVSEKNRY ALEIAAGNRL GQIVVDNDHI AAKAIEILKK KKAGRLTFLP
LNRIKSQKKN YVISRFENHR ENGFIDKAIN LITFDEVYSD VFRYVFGDTL VFSDLSSARL
STQKNRLVTL SGELLEASGA ITGGSKLNKD LAYRFGTNNE IDDSSPIKER LLVIEEALKE
SNNDLILKNN RLNTLNSNRS QIIEDCASFN KEIEVNQDSL KAVSQRIEDC KSRLKKLDIA
NNLLVNELGH LKNQLKPYYD KFDQLQTIQK ANYEKNQKSS LIAFNDDFNN LDKKLELLIK
ERNTLLDKKN QFALNKERIN NSLKITLLQE KNLQESIKQL ATAHSEWLEK RDQFKKELSD
LDNQKNSLEK NLGLLRRKRD ELNSSISNKR QEYNNYLLKL EYLERDMHTL KEEMRSEKIK
LENYKRDLPN PSPEFGEYEG KSLESLQSEI SIINAKLESL EPVNMLALDE LEELIERLNG
LREKLEILSN ERSELLLRIE TVSTMRQEAF MQAFTEVDRH FREIFANLSD GDGFLQLENP
NSPLEGGLTL VAHPKGKNVR RLASMSGGEK SLTALSFLFA LQKYKPSPFY ALDEVDSFLD
GINVERLSKL ISNQSSNAQF IVVSHRRPMI SASERTIGVA QARGANTQVL GLPNAA
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