Gene P9301_00341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_00341 
SymboldhsS 
ID4912269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp32468 
End bp33631 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content33% 
IMG OID640159598 
Productsoluble hydrogenase small subunit 
Protein accessionYP_001090258 
Protein GI126695372 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATAC AACAAAAATT ATCATTGATG ATTCCTGGAC CCACACCAGT TCCAGAAAAA 
GTTTTACAAG CATTGAGTAA GCATCCAATA GGCCATCGCA GCAAAGAATT CCAAGACCTC
GTACAGAGTA CTACTAAAAA TTTACAGTGG CTTCATCAAA CTCAAAATGA TGTTCTAACA
ATTACTGGTA GTGGGACAGC CGCAATGGAG GCTGGAATAA TAAATACCTT AAGTAGAGGA
GATAAAGTAA TTTGTGGAGA AAATGGAAAA TTTGGCGAAA GATGGGTAAA AGTTGCTAAA
GAATTTGGTC TAGAAGTAAT AAAAATTGAT TCGGAATGGG GAATTCCGCT TGACCCAGAA
GAATTTAGAA AAGTATTAGA GGAAGATAAA CACAAAGAAA TAAAGGCAGT TATTTTGACT
CATTCTGAAA CCTCAACAGG TGTCATTAAT GATCTAGAAA CTATAAGTTC ATATATTCGT
AAACACAACA CAGCTTTATC AATTGTTGAC TGCGTTACAA GTCTTGGTGC TTGCAATGTA
CCAGTAGATG AATGGAAATT AGATATAGTT GCTTCAGGTT CACAAAAGGG ATATATGATA
CCTCCAGGTC TTAGTTTTAT ATCTATGAGC CAAAAAGCAT GGGAAGCTGC AGAAAAATCT
AATTTACCAA AATTTTACTT AAATTTAAAA TCCTACAAAA AAAGTCTTCA AAGTAACAGT
AATCCATATA CTCCAGCAGT TAATTTGGTT TTTGCTTTAG ATGAAGCTTT AAAAATGATG
CGAGAAGAAG GCTTAGATAA CATTTTTAGG AGACACAATA AACATAAACT AGCTATGAGC
AATGCCGTAA AGGCTTTAAA TCTAAAATTA TTTGCTGATG AAAAATATTT AAGCCCTTCA
ATTACTGCAA TAAAAACCGA AGGGATGGAT GCTGAAGAAT TTAGAAAAAC AATAAAAAAT
AATTTTGATA TTTTACTTGC TGGTGGTCAA GACCATTTGA AAGGGAAAAT ATTTAGAGTC
GGACATTTAG GTTATGTTAA TGATAGAGAT ATTATTACAG TGGTTTCTGC TATTGGAAAT
ACACTTCTCA AAATGCGAAA AATTTCAGCC CAACAAGTTG GTGAAGCATT AGTTGTAGTA
TCTAAATATC TTGAGGAAAA ATAA
 
Protein sequence
MAIQQKLSLM IPGPTPVPEK VLQALSKHPI GHRSKEFQDL VQSTTKNLQW LHQTQNDVLT 
ITGSGTAAME AGIINTLSRG DKVICGENGK FGERWVKVAK EFGLEVIKID SEWGIPLDPE
EFRKVLEEDK HKEIKAVILT HSETSTGVIN DLETISSYIR KHNTALSIVD CVTSLGACNV
PVDEWKLDIV ASGSQKGYMI PPGLSFISMS QKAWEAAEKS NLPKFYLNLK SYKKSLQSNS
NPYTPAVNLV FALDEALKMM REEGLDNIFR RHNKHKLAMS NAVKALNLKL FADEKYLSPS
ITAIKTEGMD AEEFRKTIKN NFDILLAGGQ DHLKGKIFRV GHLGYVNDRD IITVVSAIGN
TLLKMRKISA QQVGEALVVV SKYLEEK