Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_00341 |
Symbol | dhsS |
ID | 4912269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 32468 |
End bp | 33631 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640159598 |
Product | soluble hydrogenase small subunit |
Protein accession | YP_001090258 |
Protein GI | 126695372 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCATAC AACAAAAATT ATCATTGATG ATTCCTGGAC CCACACCAGT TCCAGAAAAA GTTTTACAAG CATTGAGTAA GCATCCAATA GGCCATCGCA GCAAAGAATT CCAAGACCTC GTACAGAGTA CTACTAAAAA TTTACAGTGG CTTCATCAAA CTCAAAATGA TGTTCTAACA ATTACTGGTA GTGGGACAGC CGCAATGGAG GCTGGAATAA TAAATACCTT AAGTAGAGGA GATAAAGTAA TTTGTGGAGA AAATGGAAAA TTTGGCGAAA GATGGGTAAA AGTTGCTAAA GAATTTGGTC TAGAAGTAAT AAAAATTGAT TCGGAATGGG GAATTCCGCT TGACCCAGAA GAATTTAGAA AAGTATTAGA GGAAGATAAA CACAAAGAAA TAAAGGCAGT TATTTTGACT CATTCTGAAA CCTCAACAGG TGTCATTAAT GATCTAGAAA CTATAAGTTC ATATATTCGT AAACACAACA CAGCTTTATC AATTGTTGAC TGCGTTACAA GTCTTGGTGC TTGCAATGTA CCAGTAGATG AATGGAAATT AGATATAGTT GCTTCAGGTT CACAAAAGGG ATATATGATA CCTCCAGGTC TTAGTTTTAT ATCTATGAGC CAAAAAGCAT GGGAAGCTGC AGAAAAATCT AATTTACCAA AATTTTACTT AAATTTAAAA TCCTACAAAA AAAGTCTTCA AAGTAACAGT AATCCATATA CTCCAGCAGT TAATTTGGTT TTTGCTTTAG ATGAAGCTTT AAAAATGATG CGAGAAGAAG GCTTAGATAA CATTTTTAGG AGACACAATA AACATAAACT AGCTATGAGC AATGCCGTAA AGGCTTTAAA TCTAAAATTA TTTGCTGATG AAAAATATTT AAGCCCTTCA ATTACTGCAA TAAAAACCGA AGGGATGGAT GCTGAAGAAT TTAGAAAAAC AATAAAAAAT AATTTTGATA TTTTACTTGC TGGTGGTCAA GACCATTTGA AAGGGAAAAT ATTTAGAGTC GGACATTTAG GTTATGTTAA TGATAGAGAT ATTATTACAG TGGTTTCTGC TATTGGAAAT ACACTTCTCA AAATGCGAAA AATTTCAGCC CAACAAGTTG GTGAAGCATT AGTTGTAGTA TCTAAATATC TTGAGGAAAA ATAA
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Protein sequence | MAIQQKLSLM IPGPTPVPEK VLQALSKHPI GHRSKEFQDL VQSTTKNLQW LHQTQNDVLT ITGSGTAAME AGIINTLSRG DKVICGENGK FGERWVKVAK EFGLEVIKID SEWGIPLDPE EFRKVLEEDK HKEIKAVILT HSETSTGVIN DLETISSYIR KHNTALSIVD CVTSLGACNV PVDEWKLDIV ASGSQKGYMI PPGLSFISMS QKAWEAAEKS NLPKFYLNLK SYKKSLQSNS NPYTPAVNLV FALDEALKMM REEGLDNIFR RHNKHKLAMS NAVKALNLKL FADEKYLSPS ITAIKTEGMD AEEFRKTIKN NFDILLAGGQ DHLKGKIFRV GHLGYVNDRD IITVVSAIGN TLLKMRKISA QQVGEALVVV SKYLEEK
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