Gene P9301_00041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_00041 
Symbol 
ID4912394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp5884 
End bp8325 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content27% 
IMG OID640159568 
ProductDNA gyrase/topoisomerase IV, subunit A 
Protein accessionYP_001090228 
Protein GI126695342 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA AAAACTTCAC TTCTATCTCA CTTCAAGAAG AAATGCAACG TTCTTATTTG 
GAGTATGCAA TGAGCGTAAT AGTTGGACGT GCTCTACCCG ATGCAAGAGA CGGCCTTAAG
CCTGTGCAAA GAAGAATACT ATTTGCAATG TACGAGTTAG GTTTAACACC TGATAAGCCA
TTTAGAAAGT GTGCGAGAGT TGTAGGAGAT GTACTTGGAA AGTACCATCC TCATGGAGAT
CAGGCAGTAT ATGATGCATT AGTAAGGCTA GTACAAGATT TTTCTACAAA ATATCCTACT
CTTGACGGCC ATGGAAATTT TGGATCTGTA GATAACGATC CGCCAGCAGC AATGAGATAT
ACTGAAACCA GATTAGCTTC GATAGCTCAT AAAGGTTTTC TTGAAGAAAT TGGATCAGAA
ACAGTAAGTT TTTCGAATAA CTTTGACGGT TCTCAAACAG AACCAGATGT TCTTCCGGCC
CAACTTCCAT TTTTATTGTT AAACGGCTCA TCAGGTATTG CTGTCGGCAT GGCAACAAAC
ATACCCCCTC ACAACCTAGG CGAAATTGTA GATAGCTTAG TTGCTTTAGT AAAAAATAAT
GATATTAGTA ATAAAAAACT TTCTAAAATT ATTCAAGGAC CTGATTTTCC TACTGGAGGA
GAGCTAATTC ATAGTGCAGC AATAGAAGAA CTTTATGAAA CAGGAAAAGG ATCTTTAACA
ATAAGAGGAG TTATAAATAT GGAAGAAGTA AATTTAGGCA AAGGTAAACA TAAAAAGAAT
GCGCTAATAA TTACAGAACT TCCTTACCAA ATTAGTAAAG CAGGTTGGAT TGAAAAACTC
GCAGAACTTG TCAATTCAGG TAAAATTCAT GGAATCTCTG ATATTAGAGA CGAAAGCGAT
AGAGATGGAA TGAGAATTGT AATAGAGCTA AAAAAAGATT CTAATTCTGA ACTTGTTATT
TCTAATTTAT ATAAAAAAAC AACTCTTCAA ACAAACTTTG GTGCGATATT CTTAGCTTTA
ATTAAAGGCA AGCCTGTACA ATTAAGCCTA AAAAAATATC TCAACTTTTT TCTCGAATTT
AGAGAAGAAA CAATTAGAAA AAGAACTTTT TATTTTCTAA AAAACACTCT TGAAAAACTA
GAAATATTAG AAGGTTTATC TAAAGCCACA AAAAACATAA AAAAAGTTGT AGCAATTATT
GAAGAATCAG AAAATTCTGT AGAAGCTAAA TCGAAATTAA TTAAAAATTT TTTCCTAAGT
GAAAAACAAG CAAGTTCAGT TTTAGATATG CCACTAAGAA AATTAACAAA TCTAGAAAAG
AATCAAATTG ATAATGAAAT AATAAATTTG GAAGAAAAAA AGAGTTATTT TCAAAAATTA
TTAAACGAAA GAGAATTATT ACTCGAATTA CTTATAGAAG AGCTATTAAT CTTAAAGAAG
AAATACAATG TTAAACGTAA AACAAAAGTA ATTAAAAATA TCAATCAAAA TAAAGAACTA
GAAAATCTCA ATAATCAGAT ATTAGAGGAA TTCATAAATA AAAAAACTAA ATTATGCATT
GACAATAGAC TTTACTTAAA GAAAATGATT TTAGGTAATT ACAAGAAATC ATTTGAAGTT
GTAAATAAAT TTATAGATAA TAAAAATATT CAAAAATTTA TATGCAATAT TGAAAAAAAT
ATAAAATTAA TTGGCATCAC AAATACAGGA AAAGTTTTTA ATATTGATTG GGAGTCAAAT
GTAAATAATG ACTATAAATT AGACAATAAA ATACTTGGAA ATATTCATCC TAGTGAAATA
ATAAACTTTC ATTCAATTAA AAAAGAAATT AAAAATTATT TATGCATCTT GAATTCAGAT
GGAAGATTTA AAAAAGTATT ATTTGATGAA GATATGATTA AAAGTAATAG ATCTTTCACA
ATTACAAAAT TAAAAAATAA TTTAAAAACA ATTGATTCAT TTATTTCTAA TAAAAACAAA
GATTTAATAA TTTTAACCTC GATAGGAAGA ATTTTTAGAT TTAATTTATC AAATAAAATT
TTAACGCCAA CTTCTAAACA ATCCCAAGGA TTAATACTCG CAAAACTTTT ACCAAGTGAA
ACAATCGTAT CTTGTTGTCC ATTTGATAAT GGAGAAAATA TTTTTTTAAT ATCTAGACAA
GGAAAAATTT TTTGTATAAA TAGTAATGAA ATTTATTATT CCAATGAATA CAGCTTGGGT
TACTTAAATG AAAAAACCCA ACTTAAAAAC GATTGCTTCT TTAAAATAGT AACAAGTAAC
CATTATCTTG ATATTGAAAC TAATAAAAAT AAATCTGCAA GATTAGACCT AAATAAATTA
AATTTCAAAC CAAATAAATC AAAATTTTTA ATAGATTTTT TAAACTTAGA CAAAGATGAA
TATCTTGAAA ATTGTTTCCG ACTTGAAAAT TTTATCGACT AA
 
Protein sequence
MDKKNFTSIS LQEEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILFAM YELGLTPDKP 
FRKCARVVGD VLGKYHPHGD QAVYDALVRL VQDFSTKYPT LDGHGNFGSV DNDPPAAMRY
TETRLASIAH KGFLEEIGSE TVSFSNNFDG SQTEPDVLPA QLPFLLLNGS SGIAVGMATN
IPPHNLGEIV DSLVALVKNN DISNKKLSKI IQGPDFPTGG ELIHSAAIEE LYETGKGSLT
IRGVINMEEV NLGKGKHKKN ALIITELPYQ ISKAGWIEKL AELVNSGKIH GISDIRDESD
RDGMRIVIEL KKDSNSELVI SNLYKKTTLQ TNFGAIFLAL IKGKPVQLSL KKYLNFFLEF
REETIRKRTF YFLKNTLEKL EILEGLSKAT KNIKKVVAII EESENSVEAK SKLIKNFFLS
EKQASSVLDM PLRKLTNLEK NQIDNEIINL EEKKSYFQKL LNERELLLEL LIEELLILKK
KYNVKRKTKV IKNINQNKEL ENLNNQILEE FINKKTKLCI DNRLYLKKMI LGNYKKSFEV
VNKFIDNKNI QKFICNIEKN IKLIGITNTG KVFNIDWESN VNNDYKLDNK ILGNIHPSEI
INFHSIKKEI KNYLCILNSD GRFKKVLFDE DMIKSNRSFT ITKLKNNLKT IDSFISNKNK
DLIILTSIGR IFRFNLSNKI LTPTSKQSQG LILAKLLPSE TIVSCCPFDN GENIFLISRQ
GKIFCINSNE IYYSNEYSLG YLNEKTQLKN DCFFKIVTSN HYLDIETNKN KSARLDLNKL
NFKPNKSKFL IDFLNLDKDE YLENCFRLEN FID