Gene BMA10247_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_3333 
Symbol 
ID4894248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp3295533 
End bp3296666 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID640151980 
Productporin 
Protein accessionYP_001082849 
Protein GI126451266 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAA CCACCAAAAT CACGGGACTG ATAGGAGGGG CCGTGCTGGC GATCGCAGGC 
CAGCAGGCGA TGGCGCAAAG CTCGGTGACC CTCTGGGGCG TCGCGGACGT GAGCCTGCGT
TACCTGAGCA ACTCGAACGC GCAGAACGAC GGCCGCTTTT TCATGACGAA CGGCGCGATC
ACCAACAGCC GCATCGGCCT GCACGGCAGC GAAGACCTGG GCGGCGGCCT GAAGGCGATC
TTCAATCTCG AAAGCGGCGT CAATCTGCAG GACGGCGCGT TCTCGGACAG CAAGCGCATC
TTCAATCGCG CCGCCTATGT CGGCCTGACG AGCCAGTACG GCACCGTGAC GCTCGGCCGG
CAGAAGACGG TGCTGTTCGA TCTGCTGAGC GACACGTACG ATCCGCTGAC GGTCGGCAAC
TATCTGGAAA ACGCGTGGCT GCCCGTCGCG CTCGGCGCGG GCCTGTACGC GGACAACTCG
GTCAAGTATC GCGGCACGTT CGGTGGCCTG ACGATCGGCG CGATGTACTC GTTCGGCACG
GATTCGACCG CCACGGGCGC GGGCGGCTTC TCCGGCCAGC TTCCCGGCCA CATGGGCGCG
GGCAACATGT ACGGCTTCTC GCTGTCGTAC GTGGCGGGGC CCGTGAGCGT GGCGGCGGGC
GTGCAGCAGA GCAGCGACAA TTCGAACCGC AAGCAGACGA TCTATCACGC GAACGTCGTC
TACGCGTTCA GCAAGGCGAA GATCTACGCG GGCTATCTGC ATTCGAAGGA CGATACGGGC
TTCGTCGATA CGGTGCTCGC GCAGCAGCCG GGGCTCTTCA CGAGCGGCGC GCCCAAGCGC
ACCGGTCGGA TCGACGACGG CCCGTTCGCC GGCGTGAGCT GGCAGGCGAC GCCCGCGCTC
ACGCTGACGG GCGCGTTCTA CTATGACCGG ATGCGCAACG CGACGATCGC GAATGGCCAG
CTCGACAGCG GCAATCGCTA TACGGTCGTC GGCCTCGTCG AGTACGCGTT GTCGAAACGC
ACCGAGATCT ACGGCACCGT CGACTTCAAC AAGGTGAACG GTGCGGCGAT GGTCGAGATG
CCGGGCCGCA GCAACCAGAC GGGCGTCGCG ATCGGTCTGC GCAACATCTT CTGA
 
Protein sequence
MKQTTKITGL IGGAVLAIAG QQAMAQSSVT LWGVADVSLR YLSNSNAQND GRFFMTNGAI 
TNSRIGLHGS EDLGGGLKAI FNLESGVNLQ DGAFSDSKRI FNRAAYVGLT SQYGTVTLGR
QKTVLFDLLS DTYDPLTVGN YLENAWLPVA LGAGLYADNS VKYRGTFGGL TIGAMYSFGT
DSTATGAGGF SGQLPGHMGA GNMYGFSLSY VAGPVSVAAG VQQSSDNSNR KQTIYHANVV
YAFSKAKIYA GYLHSKDDTG FVDTVLAQQP GLFTSGAPKR TGRIDDGPFA GVSWQATPAL
TLTGAFYYDR MRNATIANGQ LDSGNRYTVV GLVEYALSKR TEIYGTVDFN KVNGAAMVEM
PGRSNQTGVA IGLRNIF