| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_3249 |
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| Symbol | pilD |
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| ID | 4894760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | - |
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| Start bp | 3215142 |
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| End bp | 3216056 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640151896 |
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| Product | type IV pilus prepilin peptidase PilD |
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| Protein accession | YP_001082766 |
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| Protein GI | 126449223 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCCA ATCCGTTCCT TTCCGGCTCG CCCGAACATG CGGCGGCGGC CGGGCCGCTC
GCCGCATTCG CGGCGCTCCC CACGGGCATG CAGCTTGCGT TCGCGATCGT GCTCGGCCTC
GTCGTCGGCA GCTTCATCAA CGTCGTCGTC CATCGGCTGC CGATCATGAT GAAGCGCGCG
TGGCTCGCCG AAATCGCCGA AGCGACGGGC GCGCCGTGCG CCGACGACGG CCTGCCGGCG
CGCTACAACC TCTGCGTGCC GCGCAGCGCG TGCCCGCACT GCGGCCATGC GCTGCGCGCG
TGGGAAAACG TGCCGGTCCT CAGCTATATC GCATTGCGGG GCCGGTGCCG GCACTGCCGT
ACGCCGATCG GCGCGCGCTA TCCGCTCATC GAACTCGCGA GCGGCGCGCT CGCCGCCGGC
GCGCTCGCGC TGTTCGGGCC GAGCGGCGCC GCACTCGCCG CGTTCGGCCT GTGCGCGGCG
CTCCTCGCGA TGAGCGCGAT CGACATGCAG ACCGGCTTCC TGCCCGATTC GCTCACGTTG
CCGCTCCTGT GGGCCGGGCT GTGCGTCAAT CTCTGGGGCA CGTTTGCGAG CCTGCGCGCC
GCGGTGATCG GCGCGATCGC CGGCTATCTG TTCCTCTGGT GCATTCTGTG GCTCTTCAAA
CTGCTGCGCG GCATCGAAGG AATCGGCTAC GGCGACCTGA AGCTCCTCGC CGCGCTCGGC
GCATGGCTCG GCTGGGAAGC ATTGCCGCAG GTCGTGCTGA TCGCAGCGGT CGCCGGCGCC
GCGGTCGGTC TCGTCGCAAC CTGGCGCGGC CGCATGCGCT TCGAGGAACC GTTGCCATTC
GGCCCGTTCC TCGCGGCGGG CGGCGCCGCG ACCCTCTTTT TCGGCACGCC GTTCTACCTG
CTGCTCGGAG GCTGA
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| Protein sequence | MTPNPFLSGS PEHAAAAGPL AAFAALPTGM QLAFAIVLGL VVGSFINVVV HRLPIMMKRA
WLAEIAEATG APCADDGLPA RYNLCVPRSA CPHCGHALRA WENVPVLSYI ALRGRCRHCR
TPIGARYPLI ELASGALAAG ALALFGPSGA ALAAFGLCAA LLAMSAIDMQ TGFLPDSLTL
PLLWAGLCVN LWGTFASLRA AVIGAIAGYL FLWCILWLFK LLRGIEGIGY GDLKLLAALG
AWLGWEALPQ VVLIAAVAGA AVGLVATWRG RMRFEEPLPF GPFLAAGGAA TLFFGTPFYL
LLGG
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