| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_3221 |
|---|
| Symbol | |
|---|
| ID | 4891589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 3184510 |
|---|
| End bp | 3185670 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640151868 |
|---|
| Product | putative outer membrane porin |
|---|
| Protein accession | YP_001082738 |
|---|
| Protein GI | 126450576 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT CGCTTCTCGC GCTCGTCGCG CTGAGCGCGT TTGCTGGCGC GGCTCATGCG
CAAAGCAGCG TGACGCTGTA CGGCATCATC GACGAAGGCT TCAACATCAA TACCAATGCA
GGCGGCAAGC ACCTGTACAA CCTGTCGAGC GGTGTCATGC AGGGTAGCCG TTGGGGCCTG
CGCGGCACGG AAGACCTGGG CGGTGGCCTG AAGGCGCTGT TCGTCCTCGA AAACGGCTTC
GACGTGAACT CGGGCAAGCT GAACCAGGGC GGCCTCGAAT TCGGCCGTCA AGCGTACGTC
GGCCTGTCGA GCGGCTTCGG CACCGTCACG CTCGGCCGTC AGTACGACTC CGTCGTCGAC
TTCGTCGGCC CGCTGGAAGC CGGCGACCAG TGGGGCGGCT ACATCGCCGC TCACCCGGGC
GATCTCGACA ACTTCAACAA CGCATATCGC GTGAACAACG CAGTCAAGTT CACGAGCGCG
AACTACGGCG GCTTCACGTT CGGCGGCCTG TACAGCTTCG GCGGCGTCGC CGGCGACTTC
AGCCGCAACC AGACCTGGTC GCTCGGCGCG GGCTACACGA ACGGCCCGCT CGTGTTGGGC
GTCGGCTACC TGAACGCGCG CACGCCGTCG ACGGCTGGCG GCCTGTTCGG CAACAACACG
ACGTCGAGCA CGCCGGCTGC CGTGACGACC CCGGTCTACG CGGGCTATGC GTCGGCCCAT
ACGTACCAGG TGATCGGTGC GGGCGGCGCC TATTCGTTCG GCGCGGCGAC GGTCGGCATC
ACGTACTCGA ACATCAAGTT CATGAACTTC GCGAGCACGG TGTTCCCGAA CCAGACCGCG
ACGTTCAACA ACGCGGAAAT CAACTTCAAG TATCAGTTGA CCCCGACGCT GCTCGCCGGC
GCGGCGTATG ACTACACGCA AGGCAGCAAG ATCGCCGGCT CGTCCGCGGC CAAGTATCAC
CAAGGCTCGG TCGGCGTCGA CTACTTCCTG TCGAAGCGCA CCGACGTCTA CGCGATCGGC
GTGTATCAGC ACGCTTCGGG CAACGTGATC GAAGCCGACG GCAACACGGT CGGCCCGGCG
ACCGCCGCGA TCAACGGCCT GACGCCGTCG TCGAACCGCA ACCAGTTCGC AGCGCGCGTC
GGCATCCGCC ATAAGTTCTA A
|
|---|
| Protein sequence | MKKSLLALVA LSAFAGAAHA QSSVTLYGII DEGFNINTNA GGKHLYNLSS GVMQGSRWGL
RGTEDLGGGL KALFVLENGF DVNSGKLNQG GLEFGRQAYV GLSSGFGTVT LGRQYDSVVD
FVGPLEAGDQ WGGYIAAHPG DLDNFNNAYR VNNAVKFTSA NYGGFTFGGL YSFGGVAGDF
SRNQTWSLGA GYTNGPLVLG VGYLNARTPS TAGGLFGNNT TSSTPAAVTT PVYAGYASAH
TYQVIGAGGA YSFGAATVGI TYSNIKFMNF ASTVFPNQTA TFNNAEINFK YQLTPTLLAG
AAYDYTQGSK IAGSSAAKYH QGSVGVDYFL SKRTDVYAIG VYQHASGNVI EADGNTVGPA
TAAINGLTPS SNRNQFAARV GIRHKF
|
|---|
| |