| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_2973 |
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| Symbol | mnmC |
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| ID | 4891838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | + |
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| Start bp | 2930474 |
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| End bp | 2932609 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640151621 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001082493 |
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| Protein GI | 126449742 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCCG CGCGGCTTTC GGGCCGCGCG AACCGGCTTC GCCGCGGCTT GGCCGAAGCC
CGCGCGCGGT TTCGTTGGAT TTTGCCAACG CCAGGCGGGA CGGGGCTCTC GCGGCGGTTC
GCCGCATTTT CGCCGCCTTC ATTTTTGTTT CGCATGACCG ATCGAATCGT TCCGGCGACG
CTCGTCTTCC GCGAGGACGG CACCGTCGTC TCGCCGCTCT ACGGCGACAT CTACCACAGC
GCGGCCGGCG CGCTCGCCCA GGCCGACCAC GTGTTCATCC GCGGCAACGG CCTGCCGGAA
CGTTGGCGGC ACGAGCGAGC TTTCACGATT ATCGAGACAG GATTCGGCAC GGGCTGCAAC
TTTCTCGCGA CATGGGCTGC ATGGCGTGCG GATCCGTCGC ACTGCGAGCG GCTTCACTTC
GTCTCGGTCG AAAAGCATCC GTTCGCGCGC GAAGATCTGC GGCGCGCGGC CGCGCATATC
GTTGCATATA CAACTATTAC AACTATTACG CCGATTGCGC CGCTCGTCGA CGAGCTCGCG
AACGCATGGC CCGCGCTGAC GCCGGGCGTG CATCGTCTCG AATTCGACGA CGGGCGCGTC
ACGCTCACGC TCGTGTTCGG CGACGCGCTC GACGTGCTGC CGAACCTCGC GCTGCGCGCG
CACGCGTTCT ATCTCGACGG CTTCGCGCCG TCGAAGAACG CGGATTTGTG GTCGCCCGCG
ATCTTCAAAT CGCTCGCGAA GCTTGCCGAC GAACGCGCGA CGTTCGCGAC CTACACGAGC
TCCGGCGCCG TCAAGCGCGC GCTCGACGAA GCGGGTTTCG CGTACCGAAA AGTCGACGGC
TTCGCCGGCA AGCGCGCCAT GCTCGTCGGC GAATTCGCGC CGCGCTGGCG CGTGCGCCGC
CATGAGCCGC CGCGTGCGTT CAGCACGGAT AGACGCGACG CGATCGTGAT CGGCGCGGGC
CTCGCCGGCT GCGCGGTCGT CGAGCGGCTC GCCGCGCGCG GCTGGCACGT GACGCTGATC
GAGCGGCGCG AGCGGATCGC GAGCGAGGCG TCGGGCAACC CCGCCGGCGT ATTCCATCCG
ATGATCGCGC GCGACGATAA CCTCGCGGCC CGCCTGTCGC GCGCCGGCTT CCTGCACGCG
CTGCATCGCT GGCGCGCGCT CGAGCGCGCC GGGCATGCGT TCTCGCGCAG CACACATGGC
CTCGTTCAGC TTGCCACGTC GGACGATGAA TTCGAGCGGA TGCGCGAGAG CATCGACGCG
CTCGGCGTGC CGGCCGAGCT CGCCTCGGCG CTGTCGCGCG ACGACGCGAG AGCGCTGTTG
CGAACCGACG TCGCGCACGG CGGCTGGCTG TTTGCGCAGG GCGGCTCGAT CAGCCCCGCC
ACGCTCGCGG CCGCTCAGTG CGCGGCCGCG GGCGACAGGC TTTCGCGCAT CGTCGGCGTC
GAGATCGCGC GGCTCGAACG CGGCGGCGAC GGCCGCTGGC GCGCGCTCGA CGCATCGGGC
GCGACGATTG CGCAGGCGAG CGTCGTCGTC GTCGCGAACG CGGCCGATGC GGCGCGCATC
GCGGGCCTGC GGCATGCGCC GACGCAACGC GTGCGCGGCC AGTTGACGCT GCTGCCGCCG
GGCAGCGCGC CCGCCGTGCC GCTGCCCGTG ATCGGCGACG GCTACGTCGT GCCGCTCGCG
AACGGCGTCA CGCTGACGGG CGCAACCTAT GAACCGGACG ATACGGATGC GACACCGCGC
GAAGCCGGCC ATCGCGAGAA CCTCGAGCGG CTCGAACGGC TGCTGCCAGC GTTTTCCGCG
AACGCGCTCG ATGCGGGCGC GCTCGCGGGC CGCGTCGGCT TTCGCTGCGT CGCGAGCGAC
CGGCTGCCGC TCGTCGGCGA GCTCGGCGAC GAGGCGGCGG CCGCGCGCGA GGCGGCGGCG
CTGACGGGCG CACGGCTGCG CGACGTGCCG CGCGCGACGG GCCTCTACGG CGCCTTCGGT
TACGGCTCGC GCGGGCTCGT CTGGGCGGCG CTCGGCGCCG AGCTGATCGC CGCGCAGATC
GACGGCGAGC CGTGGCCGCT CGAGCGCGAA CTCGCCGAAG CGATCGACCC GGCGCGCTTC
CTCGTTCGCG CGCTGCGGCA CGGCCGCGTC GCCTGA
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| Protein sequence | MRSARLSGRA NRLRRGLAEA RARFRWILPT PGGTGLSRRF AAFSPPSFLF RMTDRIVPAT
LVFREDGTVV SPLYGDIYHS AAGALAQADH VFIRGNGLPE RWRHERAFTI IETGFGTGCN
FLATWAAWRA DPSHCERLHF VSVEKHPFAR EDLRRAAAHI VAYTTITTIT PIAPLVDELA
NAWPALTPGV HRLEFDDGRV TLTLVFGDAL DVLPNLALRA HAFYLDGFAP SKNADLWSPA
IFKSLAKLAD ERATFATYTS SGAVKRALDE AGFAYRKVDG FAGKRAMLVG EFAPRWRVRR
HEPPRAFSTD RRDAIVIGAG LAGCAVVERL AARGWHVTLI ERRERIASEA SGNPAGVFHP
MIARDDNLAA RLSRAGFLHA LHRWRALERA GHAFSRSTHG LVQLATSDDE FERMRESIDA
LGVPAELASA LSRDDARALL RTDVAHGGWL FAQGGSISPA TLAAAQCAAA GDRLSRIVGV
EIARLERGGD GRWRALDASG ATIAQASVVV VANAADAARI AGLRHAPTQR VRGQLTLLPP
GSAPAVPLPV IGDGYVVPLA NGVTLTGATY EPDDTDATPR EAGHRENLER LERLLPAFSA
NALDAGALAG RVGFRCVASD RLPLVGELGD EAAAAREAAA LTGARLRDVP RATGLYGAFG
YGSRGLVWAA LGAELIAAQI DGEPWPLERE LAEAIDPARF LVRALRHGRV A
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