| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_2218 |
|---|
| Symbol | |
|---|
| ID | 4893617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 2190727 |
|---|
| End bp | 2192223 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640150871 |
|---|
| Product | TldD/PmbA family protein |
|---|
| Protein accession | YP_001081747 |
|---|
| Protein GI | 126448663 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.762939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA TCGAACCCGG CATCCCCCAA GGGGACTTCC TTCAGGGCGC CCGCAACCTC
TCGCTCGCGA AGGACATCCT GCTCACGCCG TACGGCCTCG ACGAAGCCCT TCTCACGCGC
ACGCTCGCCG ATATCTTCAC GCATCGCGTC GACTACGCGG ATCTGTACTT CCAGGCCACC
CGCAGCGAAG CGTGGAGCCT CGAGGAAGGC ATCGTCAAGT CGGGCAGCTT CAGCATCGAC
CAGGGCGTCG GCGTGCGCGC GGTCGCCGGC GAGCGCACCG CGTTCGCGTA CTCGGACGAC
CTGTCGCCCG AGGCGATCCG CCAGGCGGCC GTCGCGACGA AGGCGATCGC GGCCGCGGGC
GGCGGCAAGC AGAAGATCCG CGCGGCGACG GCGCTGAAGG GCGTCTCGGG GCGCGACCTG
TATCTGCCCG CCGATCCGCT CGCCTCGCTC GACGCGACCG CGAAGGTGAA GCTGCTCGAG
CGCGTCGAGC AGATGGCGCG CGGCCGCGAC CCGCGCATCA AGCAGGTGAT GGCGGGGCTC
GCCGGCGAAT ACGACGTCGT GCTCGTCGCG CGCAGCGACG GCGCGCTCGC GGCGGACATC
CGCCCGCTCG TGCGCGTATC GGTGACGGTG ATCGCCGAGC ACAACGGCCG GCGCGAGATC
GGCACGGGCG GCGGCGGCGG CCGCTTCGAC TACGGCTACT TCACCGACGA CGTGCTCGCG
CGCTACGTCG ACGACGCGGT GCACGCCGCG CTCGTCAACC TCGACGCGCG CCCGGCGCCC
GCGGGCGCGA TGACGGTCGT GCTCGGCCCG GGCTGGCCCG GCGTGCTGCT GCACGAGGCG
ATCGGCCACG GGCTCGAGGG CGACTTCAAC CGCAAGGGCT CGTCGGCGTT CGCGGGCCGC
ATCGGCGAGC AGGTTGCGGC CAAGGGCGTG ACCGTCGTCG ACGACGGCAC GCTGCCGAAC
CGCCGCGGAT CGCTGAACAT CGACGACGAG GGCAACCCGA CGCAGTGCAC GACGCTCATC
GAGGACGGCA TCCTGAAGGG CTACATCCAG GACACGCTGA ACGCGCGGCT GATGAAGATG
CCCGTCACCG GCAACGCGCG GCGCGAATCG TACGCGGCGC TGCCGATGCC GCGGATGACC
AACACCTACA TGCTCAACGG CGACAAGGAC CCGCGGGAGA TCATCGAATC GGTCAAGCAC
GGCCTGTACG CGGTGAACTT CGGCGGCGGC CAGGTCGACA TCACGAACGG CAAGTTCGTG
TTCTCGGCGT CCGAGGCATA CATGATCGAG AACGGCAAGG TCACGTATCC GGTCAAGGGC
GCGACGCTGA TCGGCAGCGG CCCGGAATCG CTCAAGTACG TGAGCATGAT CGGCAACGAC
ATGCGGCTCG ACACGGGCGT CGGCGTGTGC GGCAAGGAAG GCCAGAGCGT GCCCGTCGGC
GTCGGCCAGC CGACGCTGCG GCTCGACAAC ATGACGGTGG GCGGCACCGC GTCGTAA
|
|---|
| Protein sequence | MNIIEPGIPQ GDFLQGARNL SLAKDILLTP YGLDEALLTR TLADIFTHRV DYADLYFQAT
RSEAWSLEEG IVKSGSFSID QGVGVRAVAG ERTAFAYSDD LSPEAIRQAA VATKAIAAAG
GGKQKIRAAT ALKGVSGRDL YLPADPLASL DATAKVKLLE RVEQMARGRD PRIKQVMAGL
AGEYDVVLVA RSDGALAADI RPLVRVSVTV IAEHNGRREI GTGGGGGRFD YGYFTDDVLA
RYVDDAVHAA LVNLDARPAP AGAMTVVLGP GWPGVLLHEA IGHGLEGDFN RKGSSAFAGR
IGEQVAAKGV TVVDDGTLPN RRGSLNIDDE GNPTQCTTLI EDGILKGYIQ DTLNARLMKM
PVTGNARRES YAALPMPRMT NTYMLNGDKD PREIIESVKH GLYAVNFGGG QVDITNGKFV
FSASEAYMIE NGKVTYPVKG ATLIGSGPES LKYVSMIGND MRLDTGVGVC GKEGQSVPVG
VGQPTLRLDN MTVGGTAS
|
|---|
| |