| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_2004 |
|---|
| Symbol | |
|---|
| ID | 4892107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 1973663 |
|---|
| End bp | 1974322 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640150659 |
|---|
| Product | polar amino acid ABC transporter permease |
|---|
| Protein accession | YP_001081536 |
|---|
| Protein GI | 126450004 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.695709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGT TCGATCTGGT CGTGCATACC CTCCCCGTCC TCGCGAAAGG CGCGGCCCTC
ACGATGAAGT TCGCGGTCGC GTCGATGGTG CTCGGATTGA TCGTCGGCCT GCTCGTCGCG
CTCGTGCGGA TCGGCAGCAA CCGGCTGCTG TCCGCGATCG CGCAGGGCTA CGTGAGCCTG
ATGCGCGGCA CGCCGCTGCT CGTGCAGATG TTCGTCGTCT ACTACGGGTT GCCCGACATC
GGCATCTCGC TCGACCCGAC GGCGGCCGGC ATCTTCACGC TCACGCTCAA CGCGGGCGCG
TACCTGTCCG AGAACATGCG CGGCGCGATC CTCGGCATCG GCCGCGGCCA GTGGGCCGCG
TCGCACAGCC TCGGCCTCAC GCACGTGCAG ACGCTGCGCC ACGTGATCTG CCCGCAGGCG
CTGCGTCTCG CGGTGCCGAG CCTCGGCAAC ACGCTGATCA GCCTCATCAA GGACACGTCG
CTCGTGTCCG TCATCACCGT CACGGAGCTG CTGCGCTCGA CGCAGGAAGT GATCGCGTCG
ACGTTCCAGC CGCTGCCGCT GTATCTGGCC GCCGCCGCGA TCTACTGGGT GCTGAGCACG
CTGCTCGCGC GGCTGCAGGG CCGCATCGAA ACGCGCTGCG CGCTGCCGTC CGCGCACTGA
|
|---|
| Protein sequence | MQAFDLVVHT LPVLAKGAAL TMKFAVASMV LGLIVGLLVA LVRIGSNRLL SAIAQGYVSL
MRGTPLLVQM FVVYYGLPDI GISLDPTAAG IFTLTLNAGA YLSENMRGAI LGIGRGQWAA
SHSLGLTHVQ TLRHVICPQA LRLAVPSLGN TLISLIKDTS LVSVITVTEL LRSTQEVIAS
TFQPLPLYLA AAAIYWVLST LLARLQGRIE TRCALPSAH
|
|---|
| |