Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1500 |
Symbol | lpdA |
ID | 4891593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1488491 |
End bp | 1490260 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640150158 |
Product | pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase |
Protein accession | YP_001081047 |
Protein GI | 126449081 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.628337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC GAGGTCAACG TCAAACCCGG CGACGTGATC GAAAAAGAGC AAACGCTCAT CACGCTCGAA TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACCGTGAA GGAAATCAAG ATCAAGGCCG GCGACAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCATCGGCA GGCGCCGCCG CACCCGCACC CGCGAAAGCC CCCGAAGCAC CGAAGCCCGC AGCAGCTGCA CCGGCTCCGG CCGCCGCCCC GGCACCCGCG CCGCAAGCCG GCAGCTCCAG CGGCTCCGCC GACATCGAGT GCGACATGCT CGTGCTCGGC GCCGGCCCCG GCGGCTACTC GGCCGCGTTC CGCGCCGCCG ACCTCGGCAT GAAGACGGTG CTGGTCGAAC GCTACTCGAC GCTCGGCGGC GTGTGCCTGA ACGTCGGCTG CATTCCGTCA AAGGCATTGC TGCACACGGC GCTCGTCGTC GAGGAAGCGC AGGCGCTCGC GTCGCACGGC ATCACGTTCG GCAAGCCGCA GGTCGAGCTC GACAAGCTGC GCGATTTCAA GGGCGGCGTC GTCAAGAAGC TGACGACGGG CCTCGCCGGC ATGGCGAAGG CGCGCAAGGT CGAAGTGGTC ACGGGCGTCG GCGCGTTCGT CGATCCGTAT CACATGGAAG TGCAGGGCGA AAACGGCAAG AAGATCGTCA AGTTCAAGCA GGCGATCATC GCCGCCGGCT CGCAGGCGGT GAAGCTGCCG TTCATGCCGG AAGACCCGCG CGTCGTCGAT TCGACGGGCG CGCTCGAACT GCGTCAGTTG CCCAAGCGCA TGCTCGTGAT CGGCGGCGGC ATCATCGGCC TCGAAATGGC GACGGTGTAC TCCACGCTCG GTGCCGAGAT CGACGTCGTC GAAATGATGG ACGGCCTGAT GATGGGCGCG GACCGCGATC TCGTGAAGGT CTGGGAAAAG TACAACGCGA AGCGCTTCGG CAACGTGATG CTCAAGACCA AGACGGTCGG CGCGCAAGCG AAGGAAGACG GCATCTACGT GACGTTCGAG GGCGAGAAGG CGCCGGCGCA AGCGCAGCGC TACGACCTCG TGCTCGTCGC GGTGGGCCGC AGCCCGAACG GCAAGAAGAT CGGCGCCGAC AAGGCGGGCG TGGCGGTCAC CGACCGCGGC TTCATCGAGG TCGACAAGCA GATGCGCACG AACGTGCCGC ACATCTTCGC GATCGGCGAC ATCGTCGGCC AGCCGATGCT CGCGCACAAG GCCGTGCATG AAGGCCACGT CGCGGCCGAA GCCGCGCACG GCGAGAAGGC ATACTTCGAC GCGCTGCAGA TCCCGTCGGT GGCGTACACC GATCCGGAAG TGGCATGGGC CGGCAAGACG GAAGACCAGT GCAAGGCCGA AGGCATCAAG TACGGCAAGG CGGTGTTCCC GTGGGCCGCA TCGGGCCGCG CGATCGCGAA CGGCCGCGAC GAGGGCTTCA CGAAGCTGCT CTTCGACGAG GAAACCCACC GCGTGATCGG CGGCGGCATC GTCGGCCTGA ACGCGGGCGA CCTGATCAGC GAAGTGTGCC TCGCGGTCGA GATGGGCGCG GACGCGGAAG ACATCGGCAA GACGATCCAT CCGCACCCGA CGCTCGGCGA ATCGATCGGC ATGGCCGCCG AGCTGTACGA AGGCGTTTGC ACGGATCTGC CGCCGCAGCG CAAGAAGTAA
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Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEIK IKAGDKVSQG TVIAIVEASA GAAAPAPAKA PEAPKPAAAA PAPAAAPAPA PQAGSSSGSA DIECDMLVLG AGPGGYSAAF RAADLGMKTV LVERYSTLGG VCLNVGCIPS KALLHTALVV EEAQALASHG ITFGKPQVEL DKLRDFKGGV VKKLTTGLAG MAKARKVEVV TGVGAFVDPY HMEVQGENGK KIVKFKQAII AAGSQAVKLP FMPEDPRVVD STGALELRQL PKRMLVIGGG IIGLEMATVY STLGAEIDVV EMMDGLMMGA DRDLVKVWEK YNAKRFGNVM LKTKTVGAQA KEDGIYVTFE GEKAPAQAQR YDLVLVAVGR SPNGKKIGAD KAGVAVTDRG FIEVDKQMRT NVPHIFAIGD IVGQPMLAHK AVHEGHVAAE AAHGEKAYFD ALQIPSVAYT DPEVAWAGKT EDQCKAEGIK YGKAVFPWAA SGRAIANGRD EGFTKLLFDE ETHRVIGGGI VGLNAGDLIS EVCLAVEMGA DAEDIGKTIH PHPTLGESIG MAAELYEGVC TDLPPQRKK
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