| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1491 |
|---|
| Symbol | ptpA |
|---|
| ID | 4891881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 1478324 |
|---|
| End bp | 1478818 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640150149 |
|---|
| Product | low molecular weight protein-tyrosine-phosphatase |
|---|
| Protein accession | YP_001081038 |
|---|
| Protein GI | 126448105 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGCT GCACGATGAA AAGCGTCGCG ATCTGTTTCG TCTGCCTCGG CAATATCTGC
CGCTCGCCCA CCGCGGAAGG GGTGATGCGC CATCAGGTGG CTGCAGCGGG GCTCGACGGG
GCGATCGAGA TCGATTCGGC CGGCACGGGC GACTGGCATG TCGGCGAAGC GCCCGACGCG
CGCGCGCAGC AAGCGGCGCG TGCGCGGGGC TACGATCTGT CGGCGCTGCG GGCGCGGCAG
ATCGGCGACG CCGATTTCGA ACGCTTCGAT CTCGTGCTCG CGATGGACGG CGCCAATCTT
GCGGCGTTGC GCAAGCGCTG CCCGCCGCAA TATCGGGGCA AGGTCCGGCT CCTGATGGAA
TTCGCGGGCG ACGGCTCGGC CGGCGACATC GCCGATCCAT ATTTCGGCGG CGCGCGCGGC
TTCGAGCAGG TGCTCGATCA GTGCGAGGCC GCGTGCCGCG GCCTTCTCGA CAGCCTGCGT
GAAACGGCGC GCTGA
|
|---|
| Protein sequence | MSGCTMKSVA ICFVCLGNIC RSPTAEGVMR HQVAAAGLDG AIEIDSAGTG DWHVGEAPDA
RAQQAARARG YDLSALRARQ IGDADFERFD LVLAMDGANL AALRKRCPPQ YRGKVRLLME
FAGDGSAGDI ADPYFGGARG FEQVLDQCEA ACRGLLDSLR ETAR
|
|---|
| |