| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1259 |
|---|
| Symbol | ispD |
|---|
| ID | 4894670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 1241318 |
|---|
| End bp | 1242028 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640149917 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001080810 |
|---|
| Protein GI | 126451050 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0583297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCCC GACTTTTTGC CCTGATTCCG TGCGCCGGCA CCGGCAGCCG TTCCGGCTCG
GCATTGCCGA AGCAATACCG CACGCTCGCC GGACGCGCGC TGCTGCACTA CACGCTTGCC
GCGTTCGACG CATGCAGCGA GTTCGCGCAG ACGCTCGTCG TGATCTCTCC CGACGACGCC
CACTTCGACG CGCGCCGCTT CGCCGGCCTG CGCTTCGCGG TGCGGCGCTG CGGCGGCGCG
TCGCGGCAGG CGTCGGTGAT GAACGGGCTG ATCCAGCTCG CCGAATTCGG CGCGACGGAC
GCCGACTGGG TGCTCGTGCA CGACGCCGCG CGCCCCGGCA TCACGCCGGC GCTGATCCGC
ACGCTGATCG GCGCGCTGAA GGACGACCCC GTCGGCGGCA TCGTCGCGCT GCCGGTCGCC
GACACGCTCA AGCGCGTGCC GGCGGGCGGC GACGCGATCG AGCGCACCGA ATCGCGCAAC
GGCCTCTGGC AGGCGCAGAC GCCGCAGATG TTCCGCATCG GCATGCTGCG CGACGCGATC
CGGCGCGCGC AGCTCGATGG CCACGACCTG ACCGACGAGG CGAGCGCGAT CGAATGGGCG
GGCCACACGC CGCGCGTCGT GCAGGGCAGC CTGCGCAACT TCAAGGTCAC CTATCCGGAG
GATTTCGACC TCGCGGAGGC GATCCTCGCG CAACCGGCGC GCGCTTCCTG A
|
|---|
| Protein sequence | MTSRLFALIP CAGTGSRSGS ALPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVISPDDA
HFDARRFAGL RFAVRRCGGA SRQASVMNGL IQLAEFGATD ADWVLVHDAA RPGITPALIR
TLIGALKDDP VGGIVALPVA DTLKRVPAGG DAIERTESRN GLWQAQTPQM FRIGMLRDAI
RRAQLDGHDL TDEASAIEWA GHTPRVVQGS LRNFKVTYPE DFDLAEAILA QPARAS
|
|---|
| |