| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1254 |
|---|
| Symbol | |
|---|
| ID | 4892950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 1237720 |
|---|
| End bp | 1239078 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640149912 |
|---|
| Product | sensor histidine kinase RisS |
|---|
| Protein accession | YP_001080805 |
|---|
| Protein GI | 126451184 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00703057 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG ACCGGCGCCT CTTGACGCTC GTGTTCGGCG GGCTGTTCTG GCGCACCTTC
CTGCTGATCG CGCTGTTGAT CGCAGTCAGC CTCGCCGCGT GGTTCCAGAG CTTCCGAGTG
ATCGAGCGCG AGCCGCGCGC GCAGCGCGTC GCGCTGCAGC TCGTCGCCAT CGTGAAGCTC
ACGCGCACGG CCCTGCTCTA TTCCGATCCC GATCTGCGCC GCGCGCTGCT GCAGGATCTC
GAGAGCAACG AAGGCGTGCG CGTCTATCCG CGCGAGAAAA CCGACAAATT CAAGCTGCAG
CCCGACGAAT CGGTGAACCG GCTGATCGAG CACGACATCC GCAGCCGCCT GGGCGACGAC
ACGGTGATCG CGCAATCGGT CAACGACATC CCCGGCGTGT GGATCAGCTT CAAGATCGAC
GACGACGACT ATTGGGTCGC GCTCGACCGC GATCAGCTCG ATACCGTCAC CGGCCTGCAA
TGGGCCGGCT GGGGCCTCTT CGCGCTCGCG CTGTCGCTGA TCGGCTCGGC GTTCATCACG
AGCCTCGTGA ACCAGCCGTT CTCGCGGCTC GCGCTCGCCG CCCGCAAGGT GGGCTCCGGC
CAAACGCCGG AACCGCTGCC CGAGCGGGGA ATGGGCGTCG CCACAGAGAC GAACCGCAGC
TTCAACCAGA TGGTTCGCGA CCTCGAGCAG CTCGAGGCCG ATCGCGCGCT GATGCTCGCG
GGGATCTCGC ACGATCTGCG CACGCCGCTC GCGCGGCTGC GCCTCGAAAC CGAAATGAGC
CCGTCCGACC AGGCGACGAA GGACGCGATG GTCGACGACA TCGAGCAGAT GGACCGCATC
ATCGCCGCGT TCATCGATTA CGCGCGCCCC GCGCAGCGCA CGCCGGAGCC CGTCGATCTG
TCGCAGGTCG CCCGCGAGGT TGCCGCGCGG ATCGTCAGCG AGGACGGTGT GCAGCTCGAT
ATCCGCCTCG CGCCCGCGGC CGTGATCGAA GCCGACGAAA CGGACATGCG CCGCGTGATC
GGCAATCTCG TCGAGAACGC GCGCAAGTAC GGGCAGAGCA AGCAGGACGG CATCGCGCGC
ATCCTGCTTG AAACGCGGGT CACGCACGCG CGCGTCGAGC TCGTCGTCGC CGACGAGGGC
CCCGGCATCC CCGAGGATCA GTTGCCGCTC GTGATGCGCC CGTTCTATCG CGTCGACACC
GCGCGCAGCA AGGCCGACGG CACCGGCCTC GGCATGGCGA TCGTGCTGCG CCTCGTCAAT
CGCTACCGCG GCGCGCTGCG GCTGCGCAAC CGCACGCCCG ACGCGGGCCT CGAAGTCACG
CTGGAGTTTC CGAGCGCCAA AGCGCGTGCG GCTGCGTGA
|
|---|
| Protein sequence | MRIDRRLLTL VFGGLFWRTF LLIALLIAVS LAAWFQSFRV IEREPRAQRV ALQLVAIVKL
TRTALLYSDP DLRRALLQDL ESNEGVRVYP REKTDKFKLQ PDESVNRLIE HDIRSRLGDD
TVIAQSVNDI PGVWISFKID DDDYWVALDR DQLDTVTGLQ WAGWGLFALA LSLIGSAFIT
SLVNQPFSRL ALAARKVGSG QTPEPLPERG MGVATETNRS FNQMVRDLEQ LEADRALMLA
GISHDLRTPL ARLRLETEMS PSDQATKDAM VDDIEQMDRI IAAFIDYARP AQRTPEPVDL
SQVAREVAAR IVSEDGVQLD IRLAPAAVIE ADETDMRRVI GNLVENARKY GQSKQDGIAR
ILLETRVTHA RVELVVADEG PGIPEDQLPL VMRPFYRVDT ARSKADGTGL GMAIVLRLVN
RYRGALRLRN RTPDAGLEVT LEFPSAKARA AA
|
|---|
| |