Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1084 |
Symbol | |
ID | 4894217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1079037 |
End bp | 1080206 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640149742 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001080638 |
Protein GI | 126448439 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.346306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATGCCC GTGCGGGCAA GTCAAACCGC GACGATTATA GCCCAAGCGC CAGTCCCGCC GACGCTTCTG CGGGCGATTC GCTCGACGAC GATCTGACGA GCGACACGCT CGTCGCGCCC GCGCGCGCCG ATACCGGCGC CGATGCGCCG CGCACCGTCG ACGTGCCGCT CGCGCTCGCG GGCGAGCGCC TCGACAAGGC GCTCGCGCAG TTGTTTCCCG AGTTCTCGCG CAGCCGCCTG CAGCAGTGGA TCGAGTCGGA CCGCGTGCGC GTCAGCGGCG CGCCGGCGAA GATCCGGCAG CCCGTGCCGC TCGGCGCGAC GATCGAGCTG CTGCCCGAGC TGCTGCCCGA GCAACTCGCG TTCACGCCGG AGCCGGTGCC GCTGTCGATC GTCTACGAGG ACGACACGAT CGTCGTCGTC GACAAGCCGG CCGGCCTCGT CGTCCATCCT GCCGCCGGCA ACTGGAGCGG CACGCTGCTC AACGGCCTGC TGCACCGCTA TGCGGATGCG GCCGGCCTGC CGCGCGCCGG CATCGTGCAT CGGCTCGACA AGGAAACGTC GGGCCTGATG GTCGTCGCCC GCACGCTTGC CGCGCAGACG GACCTGGTCC GTCAATTGCA GGCGCGCACG GTGAAGCGCC GCTATTTCGC GCTCGCGTGG GGGCGGATGC CCGACGAGGG CACGATCGAT GCGCCGATCG GCCGCGATCC GCGCGAGCGC ACGCGGATGG CGGTTGTCAC GGGCGCGGCG GGCAAGCCGG CGCGCACGCA TTTCCGCACG GTCGACACGA CGCTGTGGGC GCGCCAGCCG GTATCGGCGA TCCATTGCGA TCTCGAAACC GGACGCACGC ATCAGATCCG CGTGCATTGC GCGCACGTCG GGCATCCGCT GCTCGGCGAT CCGGTGTACG GCCGCGCGCG CGGCAAGCGC TCGGTCGCGC CGCTGCCGGG CGGCTTCGCG CGGCAGGCGC TGCACGCCTG GCGGCTCGGC CTCGTGCATC CGGCGAGCGG CCGGTCGATG CAATGGCGCG CGCCGCTGCC GGCCGATCTC GCGGCGCTCG TCGACGCGCT CGGCTTCGGT GCGGACGATG CGGAATTCGG CGACGATGAC GCTGTCTATG ACGACGGTTA CGATGAAGGC ATGCCGTATG CCGACGATGA TGAGGATTGA
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Protein sequence | MNARAGKSNR DDYSPSASPA DASAGDSLDD DLTSDTLVAP ARADTGADAP RTVDVPLALA GERLDKALAQ LFPEFSRSRL QQWIESDRVR VSGAPAKIRQ PVPLGATIEL LPELLPEQLA FTPEPVPLSI VYEDDTIVVV DKPAGLVVHP AAGNWSGTLL NGLLHRYADA AGLPRAGIVH RLDKETSGLM VVARTLAAQT DLVRQLQART VKRRYFALAW GRMPDEGTID APIGRDPRER TRMAVVTGAA GKPARTHFRT VDTTLWARQP VSAIHCDLET GRTHQIRVHC AHVGHPLLGD PVYGRARGKR SVAPLPGGFA RQALHAWRLG LVHPASGRSM QWRAPLPADL AALVDALGFG ADDAEFGDDD AVYDDGYDEG MPYADDDED
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