Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0993 |
Symbol | truB |
ID | 4893621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 976341 |
End bp | 977249 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640149654 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001080552 |
Protein GI | 126448461 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.423513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGCC GCGCGCTCGA TGGCGTGCTG CTGCTCGACA AGCCGGTCGG CCTGTCGAGC AACGACGCGC TGATGCGCGC GAAGCGCCTG TATCAGGCGA AGAAGGCGGG CCACACGGGC ACGCTCGATC CGCTCGCGTC GGGACTGCTG CCGCTTTGCT TCGGCGAAGC GACGAAGTTC TCGCAGGACC TGCTCGAAGC CGACAAGACC TATGAAGCGA CGATGCGGCT CGGCGTGCGC ACGACGACGG GCGACGCCGA AGGCGACGTG CTCGACACGC GCGACGTGAG CTGCGACGAA GCGGCGGTCC GCGCGGCGCT CGCGCGCTTC GTCGGCGAGA TCGTGCAAGT GCCGCCGATG TACTCGGCGC TCAAGCGCGA CGGCAAGCCG CTTTACGAAT ACGCGCGCGC CGGCCAGACG GTCGAGCGCG AAGGGCGCAC CGTGACGATC CGCGCGCTCG CGCTCGTGTC GTGCGCGTTG CCCGACGTCA CGTTTCGCGT GACGTGCAGC AAGGGCACGT ACGTGCGCAC GCTCGCCGAG GATATCGGCG AAGCGCTCGG TTGCGGCGCG CATCTGACGA TGTTGCGGCG CACCGGGGTC GGCCCGCTGA CGCTCGAGCA CGCGGTGACG CTCGATGCGC TCGACGCCGC GACGCAGGAC GAGCGCGACG CGCGGCTCGC GCCCGTCGAT GCATTGCTGT CGACGTTTCC GTGCGTGAAG CTCGATGCGG CGCTCGCGAC GCGCTTTCTG CACGGCCAGC GGCTGAAGCT CTCCGAGCTT GCGGCGCGGC CCGACGCGGC CGAAGGTGGG CGCGTGCGCG TCTACGATGC CGATGACCGG CTGCTCGGCG TCGCGCGCGC GTCGGAAGGC GTGCTCGCGC CGGAGCGGCT CGTCGTGACG GGCGCGTGA
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Protein sequence | MARRALDGVL LLDKPVGLSS NDALMRAKRL YQAKKAGHTG TLDPLASGLL PLCFGEATKF SQDLLEADKT YEATMRLGVR TTTGDAEGDV LDTRDVSCDE AAVRAALARF VGEIVQVPPM YSALKRDGKP LYEYARAGQT VEREGRTVTI RALALVSCAL PDVTFRVTCS KGTYVRTLAE DIGEALGCGA HLTMLRRTGV GPLTLEHAVT LDALDAATQD ERDARLAPVD ALLSTFPCVK LDAALATRFL HGQRLKLSEL AARPDAAEGG RVRVYDADDR LLGVARASEG VLAPERLVVT GA
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