| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0990 |
|---|
| Symbol | nusA |
|---|
| ID | 4894873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 971319 |
|---|
| End bp | 972794 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640149651 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_001080549 |
|---|
| Protein GI | 126449841 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0472282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG AAGTGTTGAT GTTGGTGGAT GCGCTGGCGC GCGAGAAGAA CGTCGACAAG
GACGTCGTGC TGGGCGCGCT CGAAGCGGCC CTCGCGTCGG CTTCCAAGAA GCTGTTCGAC
GAAGGCGCCG AGATCCGCGT ACATATCGAT CGCGAGAGCG GTGAACACGA GACGTTCCGT
CGCTGGCTCG TCGTGCCCGA CGAGGCGGGC CTCCAAGAGC CGGATCGCGA GATCCTGCTG
TTCGAGGCGC GCGAGCAGAA GCCCGATGTC GAGGTCGGCG ACTATATCGA AGAATCGGTG
CCGTCGATCG AGTTCGGCCG GATCGGCGCG CAGGCCGCGA AGCAGGTGAT CCTGCAGAAG
GTGCGCGACG CGGAGCGCGA GCAGATCCTG AACGATTACC TCGAGCGCGG CGAGAAGATC
ATGACGGGCA CGGTGAAGCG CCTCGACAAG GGCAACTTCA TCGTCGAATC GGGCCGTGTC
GAGGCGCTGC TGCGCCGCGA CCAACTGATT CCGAAGGAAA ACCTGCGCGT GGGCGACCGC
GTGCGCGCGT ACATCGCGAA GGTCGACCGC ACCGCGCGCG GCCCGCAGAT CGAGCTGTCG
CGCACCGCGC CCGAATTCCT GATGAAGCTC TTCGAGATGG AAGTGCCGGA AATCGAGCAG
GGGCTTCTCG AGATCAAGGC GGCGGCCCGC GATCCGGGCG TGCGCGCGAA GATCGGCGTC
GTCGCGTACG ACAAGCGGAT CGATCCGATC GGCACGTGCG TCGGTATTCG CGGCTCGCGC
GTGCAGGCCG TGCGCAACGA GCTCGGTGGC GAAAACATCG ACATCGTGCT ATGGTCGGAG
GATCCCGCCC AGTTCGTGAT CGGCGCGCTC GCGCCGGCGG CCGTCCAGTC GATCGTCGTC
GATGAAGAAA AGCATTCGAT GGACGTCGTC GTCGACGAGA ACGAACTGGC TGTCGCGATC
GGCCGCAGCG GCCAGAACGT GCGTCTTGCC AGCGAACTGA CCGGCTGGCA GATCAACATC
ATGACGCCGG ACGAATCCGC CCAGAAGCAG AACGAAGAGC GCGACGCGCT GCGCGGCCTG
TTCATGGCGC GCCTCGACGT CGACGAGGAA GTCGCGGACA TCCTGATCGA CGAAGGCTTC
ACGAGCCTCG AAGAGATCGC CTACGTGCCG CTCAACGAGA TGCTCGAGAT CGAGGCATTC
GACGAGGACA CCGTGCACGA ACTGCGCAAC CGCTCGCGCG ACGCGCTGCT CACGATGGCG
ATCGCGAACG AGGAGAAGGT CGAGACGGCC GCCCTCGATC TGAAGAGCCT CGACGGCGTC
ACGCCCGAAC TGCTCGCGAA GCTGGCCGAG CAGGGCGTGC AGACGCGCGA CGATCTCGCG
GAGCTTGCCG TGGACGAGCT GGTCGACATG ACCGGCATGG AAGAGGAAGC CGCGAAGGCG
CTGATCATGA AAGCACGCGA ACACTGGTTC CAGTGA
|
|---|
| Protein sequence | MSREVLMLVD ALAREKNVDK DVVLGALEAA LASASKKLFD EGAEIRVHID RESGEHETFR
RWLVVPDEAG LQEPDREILL FEAREQKPDV EVGDYIEESV PSIEFGRIGA QAAKQVILQK
VRDAEREQIL NDYLERGEKI MTGTVKRLDK GNFIVESGRV EALLRRDQLI PKENLRVGDR
VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV
VAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENIDIVLWSE DPAQFVIGAL APAAVQSIVV
DEEKHSMDVV VDENELAVAI GRSGQNVRLA SELTGWQINI MTPDESAQKQ NEERDALRGL
FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RSRDALLTMA
IANEEKVETA ALDLKSLDGV TPELLAKLAE QGVQTRDDLA ELAVDELVDM TGMEEEAAKA
LIMKAREHWF Q
|
|---|
| |