Gene BMA10247_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_0907 
Symbol 
ID4892277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp891342 
End bp892559 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID640149570 
Productputative transporter, periplasmic substrate-binding protein 
Protein accessionYP_001080470 
Protein GI126450616 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.26662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGATCC ATGCCGAAAG CGATTGGGCA TCCGAACCGA TCGATTCGTT TGAGGCCGCC 
CGGCAATCGA AAATCGTGAC GTTTTCTCGA GCGAGGGTCG ACATGAACGT TCGCATGGGG
TGTTTATCGC TGCTGGCCGC CGTCGCATTC GACGCGCACG CGCAATCATC GGTCGTCCGG
ATCGGCGTCG CGATGCCGCT GACGGGGCCC GTCGCCCATC TGGGCAAGGA CGTGCAGAAC
GGCGCGCAGC TCGCCGTCGA CGAGCTGAAC CGCGCGCCGC CGACGATCGA AGGCAAGTCG
GTGAAGTTCG TGCTCGTCGT CGAAGACGAT CAGGGCGATC CACGGCAGGC GGTGCAGGTC
GCGCAGCGCC TCGTCGACGC GCGGGTCGCG GGCGTCGTCG GCGATCTGAA CTCGGGGCCG
ACGATCGTCG CGGCGAAGGT CTACGCGGCG GCCGGCATCG CGCAGATCGC GCCCGCCGCG
ACCCATCCCG CGTACACGCA GCTAGGCTAC AAGACCGCGT TCCGGCTGAT GGCGACCGAC
AACCAGCAAG GCGCGTCGCT CGCCGGGCTC GCCGCGAAGC TCGCGAAAGG CCGGCCGATC
GCGCTGATCG ACGATCGCGG CGCCTACGGC CAGGGCCTCA TCGATCAGAC GGAGAAGACA
CTGCGCGCGA GCGGCGTCAC GCGAATCATC CGCGACTACA CGACGGACAC CGCGGTCAAT
TTCGCGTCGA TTCTCACGCG CGTGAAGGGC GCGCATGCGG CCGTGATCGT CTACGGCGGC
GCCGATGCAC AGGCGGGGCC GATGGTGCGG CAGATGAAGG CGCTCGGAAT CGACGCGGCG
TTCGTCGGCA GCGACGGCGT GTGCACCGGG CAGTGGACGG CGCTGTCGTC GGGCGCGAAC
GAAGGCCAGT TCTGCACGCA AGCAGGCGAC CCGCGCGCGA GGATGGCGGG TTACGCGGCG
TTCGAGCGGC GTTTCGAGGC GCGCTACGGC AAGGTGATCG TGTTCGCGCC GTATGGCTAC
GACGCGGTGA TGCTGCTCGC CGACGCGATG CGGCGCGCGA ATTCGACCGA GCCGGCCGCT
TTGCTCGGCG CGCTCGCGAC GACCCGTTAC GACGGCGTGA TCGGCCGCAT CCGCTTCAGT
CCGCAGGGCG ACAACCTGAA CGGCGCGGTG ACGGTCTACC GCGTGCAGCG CGGCGCGCTC
GTGCCGGTGT CCGACTGA
 
Protein sequence
MSIHAESDWA SEPIDSFEAA RQSKIVTFSR ARVDMNVRMG CLSLLAAVAF DAHAQSSVVR 
IGVAMPLTGP VAHLGKDVQN GAQLAVDELN RAPPTIEGKS VKFVLVVEDD QGDPRQAVQV
AQRLVDARVA GVVGDLNSGP TIVAAKVYAA AGIAQIAPAA THPAYTQLGY KTAFRLMATD
NQQGASLAGL AAKLAKGRPI ALIDDRGAYG QGLIDQTEKT LRASGVTRII RDYTTDTAVN
FASILTRVKG AHAAVIVYGG ADAQAGPMVR QMKALGIDAA FVGSDGVCTG QWTALSSGAN
EGQFCTQAGD PRARMAGYAA FERRFEARYG KVIVFAPYGY DAVMLLADAM RRANSTEPAA
LLGALATTRY DGVIGRIRFS PQGDNLNGAV TVYRVQRGAL VPVSD