| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0800 |
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| Symbol | nodJ |
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| ID | 4894925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | - |
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| Start bp | 772017 |
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| End bp | 772853 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640149463 |
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| Product | ABC transporter, permease NodJ |
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| Protein accession | YP_001080363 |
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| Protein GI | 126449409 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.481965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAC GCCACTACAC GCCGTCGCCG ACGCTCGCTG CGCGCCGGCG CGAATCGGCG
TTCGCACTCG CGCTGCCCGC GAACGCCACC AACTGGATCG CCGTCTGGCG GCGCAACTAC
CTCGTCTGGC AAAAGCTGGC GATCGCATCG ATGTTCGGCA ATCTCGCCGA TCCGATGATC
TACCTGTTCG GCCTCGGGCT CGGCCTCGGG CTGATGGTCG GGCACGTCGA GGGCGTGTCG
TACATCGCGT TCCTCGCGGC CGGAACGGTC GGCTCGAGCG TGATGATCTC GGCGAGCTTC
GAATCGATGT ACTCGGGCTT CTCGCGAATG CACGTGCAAC GCACCTGGGA AGCGATCATG
CATACGCCGC TGTCGCTCGG CGACATCGTG CTCGGCGAGA TCGTCTGGGC CGCGAGCAAG
GCAATGCTGT CGGGCGCGGC GATCATGCTC GTCGCCGGCG TCCTCGGCTA CGCGAAGTTT
CCGTCGATGC TCGTCGCGCT GCCGGTGATC GCGCTCGCCG GCATCGCGTT CGCGAGCCTC
GCGATGATCG TCACCGCGCT CGCGCCGTCC TACGATTTCT TCATGTTCTA TCAAACGCTC
GCGCTGACCC CGATGCTGCT GCTGTCGGGC GTGTTTTTCC CGCTCGCGCA GTTGCCCGAA
TTCGCGCAAC ACATCGCGCA CGCGCTGCCG CTCTCGAATG CGGTCGACCT GATTCGCCCG
GCGATGCTCG ATCGCCCGGC GACCGACGTC GCGCGCCACG TCGCGATACT CGCCGCGTAT
GCACTCGGCG GCTTCTTCGT CTGTGCGCGC CTGTTCAGGC GCAGGATGAT GCGCTGA
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| Protein sequence | MDTRHYTPSP TLAARRRESA FALALPANAT NWIAVWRRNY LVWQKLAIAS MFGNLADPMI
YLFGLGLGLG LMVGHVEGVS YIAFLAAGTV GSSVMISASF ESMYSGFSRM HVQRTWEAIM
HTPLSLGDIV LGEIVWAASK AMLSGAAIML VAGVLGYAKF PSMLVALPVI ALAGIAFASL
AMIVTALAPS YDFFMFYQTL ALTPMLLLSG VFFPLAQLPE FAQHIAHALP LSNAVDLIRP
AMLDRPATDV ARHVAILAAY ALGGFFVCAR LFRRRMMR
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