| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0680 |
|---|
| Symbol | |
|---|
| ID | 4893397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 654982 |
|---|
| End bp | 655821 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640149345 |
|---|
| Product | putative fimbrial assembly chaperone |
|---|
| Protein accession | YP_001080247 |
|---|
| Protein GI | 126449382 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.902912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTT CGAGATCGCC CGGCGCGCCG GCGCGCGCGG CAAGGGCGCT GCGCTGCGCG
CTGCTCGGCG CGGCCGCCGC CGCGCCGTTC GTCGCGCAGC ACGCGCACGC GGCGGCGTCC
GTGATGATCT GGCCGATCGA TCCCGTGATC GAAAGCGGCG ACCGGGCGGC GGCGCTCTGG
CTCGAGAACC GCGATCGCCG GCCGGTGACG CTGCAGGTGC GCGTGCTCGG CTGGCGCGAG
GCGAACGGCG AGGATGTCTA CGACGAGGAT CAGCCGCGCG TGGCCGGCAG CCCGCCGATG
GCGACGGTCG AGCCCGGCAA GCGCCAGTTG ATTCGCCTCA CGCGGCTCGC GGATACGGCG
CCCGGCACCG AGCAGGCGTA TCGCGTGCTG ATCGACGAGA TCCCGCAGCC GGACGACGAC
GCGCAACCCG CCGCGAGCGG GACGTCGCTC GGCGTGAAGT TCCAGATGCA CTACTCGGTG
CCGCTCTTCG TCTACGGCGA CGGCCTGTGG ACGAAAGAGC ACCCGGACAG GCGCCGCGAT
TCGGCGACGG CGGGGCGGCC CGCGCTGCGC TGGCGCGTCG AGCACGACGG CGGCAAGCGT
TGGCTCGTCG TGTCGAATCG CGGCCCCGTG CATGCGCGCA TCACGCACGC GGCGTTCGAA
GCGAGCGGCG CGCGCGCCGA TTTCGCGCGC GGCCTGCTCG GCTACGTGCT GCCCGGCGCG
CGGATGCGCT GGGCGCTGCC CGAGACTCTC AAGCTCCATT CCAATTCCAA GCTGATCGCC
ACGGTCAACG GTGTGGCCGA TCTCGCAATC GACGTGGACG GCGCCGCTTC GAATCGGTAA
|
|---|
| Protein sequence | MKVSRSPGAP ARAARALRCA LLGAAAAAPF VAQHAHAAAS VMIWPIDPVI ESGDRAAALW
LENRDRRPVT LQVRVLGWRE ANGEDVYDED QPRVAGSPPM ATVEPGKRQL IRLTRLADTA
PGTEQAYRVL IDEIPQPDDD AQPAASGTSL GVKFQMHYSV PLFVYGDGLW TKEHPDRRRD
SATAGRPALR WRVEHDGGKR WLVVSNRGPV HARITHAAFE ASGARADFAR GLLGYVLPGA
RMRWALPETL KLHSNSKLIA TVNGVADLAI DVDGAASNR
|
|---|
| |