Gene BMA10247_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_0107 
SymbolpdxH 
ID4892035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand- 
Start bp107078 
End bp107722 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID640148776 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001079686 
Protein GI126448922 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000023808 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAC TTGCCGATCT CCGCACCAAC TACTCCCGCG CGTCGCTCGA CGCGGCGGAC 
GTGAACCCGA ATCCGTTCGT CCAGTTCGAC GTCTGGTTCA AGGAAGCGCT CGACGCGCAA 
CTGCCCGAGC CCAACACGAT GACGCTCGCG ACCGTCGACG AATCCGGCCG GCCGTCCGCG 
CGGATCGTCC TCATCAAGGG CGCCGACGAG CGCGGCTTCG TGTTCTTCAC GAACTACGAA 
AGCCGCAAGG GGCGCGAGCT CGCGCACAAC CCGAACGCGG CGCTGCTCTT CTACTGGATC 
GAACTCGAGC GCCAGGTGCG CGTCGAGGGG CGCATCGAGA AGACGAGCGA AGAGGAAAGC 
GACCGGTATT TCGCGTCGCG GCCGCTCGGC TCGCGGATCG GCGCATGGGC GTCCGAGCAG 
AGCGCGGTGA TCGAGAGCCG CGCGCTGCTC GAGGCGCGCG AGAAGGAAAT CGGCGCGCGC 
TTCGGCGAGA ACCCGCCGCG CCCGCCGCAC TGGGGCGGCT ACCGTCTCGT GCCGAGCTCG 
ATCGAATTCT GGCAGGGCCG CCCGTCGCGG CTCCACGACC GCCTGCTGTA TACGCGCGAC 
GCCGCGTCGG CGAGCGGCTG GAAGATCACG CGCCTCGCGC CGTAA
 
Protein sequence
MTTLADLRTN YSRASLDAAD VNPNPFVQFD VWFKEALDAQ LPEPNTMTLA TVDESGRPSA 
RIVLIKGADE RGFVFFTNYE SRKGRELAHN PNAALLFYWI ELERQVRVEG RIEKTSEEES 
DRYFASRPLG SRIGAWASEQ SAVIESRALL EAREKEIGAR FGENPPRPPH WGGYRLVPSS 
IEFWQGRPSR LHDRLLYTRD AASASGWKIT RLAP