Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0050 |
Symbol | dacB |
ID | 4891634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 45122 |
End bp | 46663 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640148720 |
Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
Protein accession | YP_001079630 |
Protein GI | 126448459 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACC ACGCCTGCCG CATCGCCGCC TCGCCAAGTC CGCCCCCGCC CGCCGCCGTC CGTGCGCGGC GCACGCTCGC GCGCGGCGCG ATGCTCGTCG CCGCGTGCGC CGCGCTCGCG TTCGCCGCGC CCGCCGACGC CCGCAGGAAA CCGAAGCCCC CCCGCTATCC GGCCGCGGTG TCGGCCGCGC GCAACGTGCT GCCCGCCTCG GTGCTCGTCG CGCTGCAGCG CGCGCGCGTG CCGGCGTCGA GCCTGAGCGT CGTCGTCGAG CGGATCGGCG ATCGCACGCC CGCCGTCGCA TGGAACGCGA GCCGGCCGAT GCAGCCCGCC TCGACGATGA AACTCGTGAC CACCTACGCG GGGCTGTCGC TGCTCGGCGC CGATTATCGC TGGCGTACGA GCGCGTACGC CGACGGCGAC GTCGACGAGA ACGGCACGCT GCACGGCACG CTGTACATCA AGGGCACCGG AGACCCGAAG CTCGTGCCGG AGGAACTGAT CGACCTCGTC AACAAGATCC GCCGCGCGGG AATCGTCAAC GTCGACGGCG CGCTCGTGCT CGACAAGACC TTCTTCGCGC CGCAGACGCG CGACCTGCCG CCGCTCGACG ACGACGCGAG CGCCCCGTAC AACGTCGGCC CCGACCCGCT GCTCTACGCG TTCAAGGCGC TGTCGTTTAC GGTGACGCCG ACCGACAGCG GCGCGATCGC AGTCGACGTC GTGCCGGCGC TCGCGAACCT GAACGTCGAC AACCGGCTCG TCGAGGGACA GGGCTCGTGC GACGCGGCGC GCCCGACGCT CGTGACCGAT GCGAACGGCG AGCTCACCGC GTCGTTCGCG GGCGACTATC CGCCGAGCTG CGGCCCGACG ACGACCAATC TCGCGGTGCT GAACCATTCC ACGTTCTTCG CGCGCGGCTT TCTCGCGCTG TGGCGGCAGA CGGGCGGCTC GTTCTCGGGG ACGATCGCCG AGGGCAAGGT GCCGGGCCGC GCGCGGCCCG TTGCGTCGCA CCACGGCCCG GTGCTGTCGA GCGTCGTGCA CGACATCAAC AAGTTCAGCA ACAACGTGAT GGCGCGCAAC CTGTTCCTCA CGATCGGCGC GGTCGAGCAC CGGCCGCCCG CGACGCCCGC GCAGTCGGCC GACACGATCC GCGCGTTCCT CGCGCACAGC GGGCTGCCCA CCGACGGGCT CGCGCTCGAG AACGGCTCGG GGCTGTCGCG CGACGAGCGC GTGAGCGCGC TCGGGCTCGC CGACATGCTG CAGGCGGCCA ACGCGAGCCC CGTCGCGCAG GCGTTCGTCG ATTCGCTGCC GATCGCGGGT GTCGACGGCA CGATGCGGAA CCGGCTGACG AACGCACCCG TCGGCGGCAA CGCGCACATC AAGACGGGCA CGCTGCGCGA CGTGCGCGCG ATCGCGGGCT ACGTCGCATC GGCGGACGGC TCGAGCTATG TCGTCGTCAG CTTCATCAAC GACGATCGCG CGTCGGCCGC GCGCGCGGCG CACGACGCGC TGCTCGAATG GGTGTACGAA GGGCCACGCT GA
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Protein sequence | MNHHACRIAA SPSPPPPAAV RARRTLARGA MLVAACAALA FAAPADARRK PKPPRYPAAV SAARNVLPAS VLVALQRARV PASSLSVVVE RIGDRTPAVA WNASRPMQPA STMKLVTTYA GLSLLGADYR WRTSAYADGD VDENGTLHGT LYIKGTGDPK LVPEELIDLV NKIRRAGIVN VDGALVLDKT FFAPQTRDLP PLDDDASAPY NVGPDPLLYA FKALSFTVTP TDSGAIAVDV VPALANLNVD NRLVEGQGSC DAARPTLVTD ANGELTASFA GDYPPSCGPT TTNLAVLNHS TFFARGFLAL WRQTGGSFSG TIAEGKVPGR ARPVASHHGP VLSSVVHDIN KFSNNVMARN LFLTIGAVEH RPPATPAQSA DTIRAFLAHS GLPTDGLALE NGSGLSRDER VSALGLADML QAANASPVAQ AFVDSLPIAG VDGTMRNRLT NAPVGGNAHI KTGTLRDVRA IAGYVASADG SSYVVVSFIN DDRASAARAA HDALLEWVYE GPR
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