Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A2350 |
Symbol | |
ID | 4890651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 2282998 |
End bp | 2284290 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640148610 |
Product | putative outer membrane porin |
Protein accession | YP_001079521 |
Protein GI | 126446530 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCCG CGCGGGCGCG TAATCATATC CATCGCAGAA TTAATTGGTT TTCGGTTCGT TTTCCTGTCC GTATCGTTCA GCGATTCGAA CGACAAATCG ACCACGAGGA AAACCACCAC ATGAAGCAAA CGAAGCATCT CGCCGCGCTC GCCGTGCCGG CCGGCTTTCT GCTGTCCGCG GGCGTGCACG CGCAAAGCAG CGTCACGCTG TACGGGATCG TCGATGCGGG CATCGCCTAC GTGCACAACG TCCAGGGCGC CGACGGCCGC AATGAGGCCT CGCTCTTCAA GTTCAGCAGC GGCAACCTGT CCGGCAGCCG CTGGGGCCTG CGCGGCACCG AGGATCTGGG CGGCGGCCTC GCCGCGCTGT TCCAGCTCGA AAACGGCTTC AATCTCGGCA CGGGGCAGCA GAACGGCAAT CGCGAATTCG GCCGCAAGGC GATCGTCGGC CTCGCGAGCA ACACGTGGGG CAGCGTCACG CTCGGCCGCC AGTACGATCC GGTCGTCGAT CTCGTACAGG GGCTCACCGA GGACAACTAC TTCGGCGGCG TGTTCGCGAC ACCGGGCGAT CTCGACAACT ACGACAACAG CCTGCGCGTG AGCAACTCGG TGAAATACAC GAGCCCGGTG CTGTCGGGCT TCCAGTTCGA AGCGCTGTAC GGCTTCGGCG GCGTCGCGGG CGCGACGGGC AGCGGCCGCA CGTACAGCTT CGCCGCAAGC TACGCGAACG GGCCGCTGTC GCTCGGCGCG GGCTACCTGT ACGCGGACGG CGGCGCGAAC GCGACGAACG GCGTGCGCAC GTGGACGGGC AGCTCGGACA CGCTGTTCAA CACCGTGATC AACCAGGGCT TCGCAAGCGC GAAGTCGATT CAGATCGTGC GCGCCGGCGG CCAGTACGTG CTCGGCTCGG CGACGTTCGG CCTCGCGTAT TCGAACACGC AGTACCGCCG CGATTCGCTG TCGGCATTCA GCGATACCGC GAAGTTCAAC AGCGGCTCCG CGTTCTTCAA CTATCAGTTC TCGCCGGCGC TGCGCGCGGG CGTGGGCTAC AACTACACGT CGCTGACGGG GCCGGCTTCC GCGCACTATC ATCAGGTGAA CCTCGGCGCG GGCTATGCAC TGTCCAAGCG CACCGATCTG TACGCGCTGT TCGGCTATCA GAAGGCGAGC GGCCATACGC TCGGCGCGAA CGGCGCGGTG ATCGACGCGC AGGCGTCCGT CGGCTCGTAT GGCGCGAACT CGGGCACCGA TTCGCAGGAA CTCGCGATCG TCGGAATTCG GCACAAGTTC TGA
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Protein sequence | MPAARARNHI HRRINWFSVR FPVRIVQRFE RQIDHEENHH MKQTKHLAAL AVPAGFLLSA GVHAQSSVTL YGIVDAGIAY VHNVQGADGR NEASLFKFSS GNLSGSRWGL RGTEDLGGGL AALFQLENGF NLGTGQQNGN REFGRKAIVG LASNTWGSVT LGRQYDPVVD LVQGLTEDNY FGGVFATPGD LDNYDNSLRV SNSVKYTSPV LSGFQFEALY GFGGVAGATG SGRTYSFAAS YANGPLSLGA GYLYADGGAN ATNGVRTWTG SSDTLFNTVI NQGFASAKSI QIVRAGGQYV LGSATFGLAY SNTQYRRDSL SAFSDTAKFN SGSAFFNYQF SPALRAGVGY NYTSLTGPAS AHYHQVNLGA GYALSKRTDL YALFGYQKAS GHTLGANGAV IDAQASVGSY GANSGTDSQE LAIVGIRHKF
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