Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A2000 |
Symbol | |
ID | 4891305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 1926550 |
End bp | 1930053 |
Gene Length | 3504 bp |
Protein Length | 1167 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640148264 |
Product | hypothetical protein |
Protein accession | YP_001079176 |
Protein GI | 126446755 |
COG category | [S] Function unknown |
COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCA CGAGCTTGAG AGTATTCGCG GCGATTCTGA TCGCGATCCT GATCTGGTGG GTGGGGCCGC TGTTCGCGTT CGGCATCTAT CACCCGCTCG GCCCGGTGTG GGTGCGCGAG ATCCTCGTCG CACTGGTGCT GATCTGGGGC TTCTGGCCGA CGCTCGCGCG GCTCTGGGCG CGGCTCGCGA TGAGCCCGCG GCAGGTGAAG GTCGCGCCGA AGGCCAAGCA GCTCGATTTC GTCGACAAGC ATCTGCGCAC CCTCGACCAG CAGTTGAAGG AGCGCTGGCG CAAGGAGCCG CGCGGCCGCT GGAAGCGCTG GGTCGGCGCG CTCACGCGCG AGCATCGCAC GATGCTGCCG TGGTATCTGG TGCTCGGCTC CGAGGGTAGC GGCAAGTCGA GCCTCGTCGC GAAGGCGGTG AGCGTGTCCG GCTCGCTGCA GGACCGGGTG CTCGGCTCGG ACGCGACCTA CGGGCGCGGC GACGACTTGA ACTTCCGCAT CACGCGCGAG GCGGTGTGGT TCGACGTCGG CGGCCGCTGG AGCCTGCGCG CGGGTGCCGA CGAGGCCGAG TTCGACGCGT GGCGCAAGCT GCTGCGCGGG ATGAGGCGGC TGCGCAGGGG CGCGCCGATC AGCGGCGTCG TGCTGTGCGT CGACGGCCTC GAGATGATCG ATGCGCCGCT CGACGCGCGC AAGCGGCTGG CCGATTCGGT GCGCGCGCGG CTCGAGGAGA TGCGCGAGGC GTTCGGCCAG CAGGTGCAGG TGTACGTTGC GCTGAACGGG CTCGACCGGC TCGACGGCGC GGTCTCGACG CTGTCGCTGC TCGAGGCGTC GAAGTGGGTC AAGGGCGTGG GCTTCAGCCT GCCCGACGAC GGCGCGCACG CCGACGCCGC GCGCGCGGAC GCGAGCTGGC AGCACGCGCT GCAAGGGCTG CAGCAGCGGG TCCAGCAGCA GGTGCTGTAT TCGGCGCCGG CGGCGACCGA GGTGTCGATG AACCACGCGC AGTTGCGCTT CGTCGAGACG CTCAGCCGCC TGCAGAAGGG GCTCGTCGCG TGGCTGCACG TCGCGCTCGC GCCGGGCGAG CCGCACACGG CCGCGCGGCT GCGCGGGGTG TGGCTGGGCT CGATGGCCGA GCTCGCGGAG CCGCATCCGG CGGGCGCGGG CGGCGTCGGC TCGGCGGAGC TGCCCGTGCC GTCGCGCCCG CTCAGCGAGC TGTGGACGCC GCTCATCCGG CAGGTGGCGC TCGAGCGCGA CGCGGTGCGC CCGAGCGGGC CGAAGTCGTG GCGCGGGCGC CTGGGCGAGG CGCTGCGCTG GGGCGCGGTG CCCCTCGTCG CGTTGAGCCT GCTGCTGTGG TTCGGCTGGG GCTACGTCAC CGAGCGCGAC TATCTGGACG GCGTCTGGGC GCAGTTCACC GAGGCCAAGC GGCTCGCGCA GGCCGAGGCG TCCTACGGCA ACGACGGCGG CTCGACGCTC ATCGAGATCG CGAACCAGAT GCGCTATGCG CAACTGCAGG CCGAGGACGC CGCGCAGGGC ATGGCGACGC CGTACTTCGA GCACGGGCTC GTCGCGGAGA CCGCGCGCGA GACCTACTAC CGGCACTTGC AGAAGATGCT GATGCCGGAG TTGTACAACG AGGTGCGGCG CACGCTCGTG TCGCAGGTCG ACGGCAGCCC GGGCGACATC TACCAGACGC TGAAGGTCTA CCTGATGCTC TGCCGCCCCG CGCGGCGCTC GGCGGACGAC GTCGTGCGCT GGCTCGACGG CCGCTGGGAC GCGCTCTCGG GCGGGCAGTA CTCGGACGAC GACCGCCGCT CGCTGCTCGC GCACGTGCGC ACGCTGATGT CGCTGAAGGA GGTGCCGGCC ACGCCGGAGG ACGCGAACCT CGTGCGCTCG GCGCGCGCGA AGGCCGCGCA GATCCCGCTC GTCACGCGCG TGCTGCAGCA CATCCACGCG CAGGGGCTGC CGCAGCAGGT CAACGACATC TCGCTGTCGC GCGCGGCGGG CTTCGAGGCG TCGATGAGCC TGCGCATGCG CAGCAACGTG CCGTCGACCG ACACCGCGGT GTCGGGCTGG TTCACGCGCG CGGGCTACAC GGACGTGTTC CTGCCGCGCC TGCAGAAGAG CGCGCGCGCG ATGCTCGAGG AGGAGAGCTG GGTGCTGCGC GACGAGACGC TGTCGGGCAA CAGCTTCCAG ATCGACGGAC TCGTGCAGAA GCTCGCCGAT TCGGCGCGCA ACCAGTTCCT GCAGGACTAC ATCTCCGCGT GGCAGAACTT CCTGAACGAC GTGACGGTGC GCGGCGTGAC GGGCCTGGAC GATGCGTCGC AGCTCGCCGC GGCGATGATG GAGGCGCAAT CGCCGCTCGC GAACCTGCTG CGCTTCGCCG CGCGCGAGAC GACGCTCACG GGCGCGAGCG ACGAAGGCAA CATCGACAGC TGGATCGATC GCCAGAAGTA CCGCTTCGAG AAGGGGCGGC GGCAGGTCGT CGGCGAGCTG AGCGGGCAGC ATTACCGCAC GGTGCTGCTG CCGGAGCACG TGGTCGAGGA GCACTTCCAG GCGATCCGCC AGCTCGCCGC GCAACTGAAC CGCAACAACA CGATCGCGAA CAACCCGCTG TCGCGGCTGT TCGAGCCGCT GTACCGGCAG CTCGGGCTCG TCAACGGCGC GCTGCAGGCG GGCCAGGTGC TGCCCGCGCA GTACGACGCG TTCTCGCGGC TGAAGGAGAC GGCCGCGCGC CAGCCGGAGC CGGTGCGCGG GATCATGCTC GACCTCGTGA GCAGCGGCAG CACGATGACG ACGCGCGAAT CGGGCGCGCT GCTCAACCGG GGCGCGGCGG GCGCGACGAA GATGGTCTGC GATCAGGGCT TCACGGGCCG CTATCCGATG CGCCGCGGCG CGCAGGCGGA TGCGGGCGTG GAGGACTTCG AGCGGCTGTT CAGCGCGCAG GGGCTGATGG CGACGTACTT CCGCGATCAC CTCGCCGCGT ATGTGGACAC GTCGGCCAAG CCGTGGCAGG CGCTGCGCTC GAACGGCGGG CCGAACGGGA TGGTGAGCCA GTCGGTGCTG AACTCGTACG AGACGGCCGA GCGCATCCGC GGCGCGATGC TCGACGATTC GGGGCACCTG CGCGTGTCGA CCGTGCTGCG TTTCATCGAC ATGGATTCGC AGTTGTCCGA AGCGCAGCTG AGCGTGGCTG GGCAGACGGT GCGCTTCGCG CACGGCGTGA CCTCGCCGCA CCGGGTGGAC TGGACCAACC AGAACACGCA GCTCGCGATC AAGCTGCAGC TCAAATCGGT GGACGGCCGG ATGACGACGC TGCAGTTCGA CGGGCCGTGG GCGCTGTTCC GCTTCTTCGA CGCGGGGCAG GCGGTGGGCG GCACGGGCAC CGCGGACCGG CGCGAGCGGC TGTATCAGAC GAGCCTCGGC ACGGTGCGCA TCGAATGGCA GGCGCTCACG CTGCCGTCGC CGATATGGTC GGGCATCCTG CAGTCGTTCA GGTGTCCGTC GTGA
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Protein sequence | MIRTSLRVFA AILIAILIWW VGPLFAFGIY HPLGPVWVRE ILVALVLIWG FWPTLARLWA RLAMSPRQVK VAPKAKQLDF VDKHLRTLDQ QLKERWRKEP RGRWKRWVGA LTREHRTMLP WYLVLGSEGS GKSSLVAKAV SVSGSLQDRV LGSDATYGRG DDLNFRITRE AVWFDVGGRW SLRAGADEAE FDAWRKLLRG MRRLRRGAPI SGVVLCVDGL EMIDAPLDAR KRLADSVRAR LEEMREAFGQ QVQVYVALNG LDRLDGAVST LSLLEASKWV KGVGFSLPDD GAHADAARAD ASWQHALQGL QQRVQQQVLY SAPAATEVSM NHAQLRFVET LSRLQKGLVA WLHVALAPGE PHTAARLRGV WLGSMAELAE PHPAGAGGVG SAELPVPSRP LSELWTPLIR QVALERDAVR PSGPKSWRGR LGEALRWGAV PLVALSLLLW FGWGYVTERD YLDGVWAQFT EAKRLAQAEA SYGNDGGSTL IEIANQMRYA QLQAEDAAQG MATPYFEHGL VAETARETYY RHLQKMLMPE LYNEVRRTLV SQVDGSPGDI YQTLKVYLML CRPARRSADD VVRWLDGRWD ALSGGQYSDD DRRSLLAHVR TLMSLKEVPA TPEDANLVRS ARAKAAQIPL VTRVLQHIHA QGLPQQVNDI SLSRAAGFEA SMSLRMRSNV PSTDTAVSGW FTRAGYTDVF LPRLQKSARA MLEEESWVLR DETLSGNSFQ IDGLVQKLAD SARNQFLQDY ISAWQNFLND VTVRGVTGLD DASQLAAAMM EAQSPLANLL RFAARETTLT GASDEGNIDS WIDRQKYRFE KGRRQVVGEL SGQHYRTVLL PEHVVEEHFQ AIRQLAAQLN RNNTIANNPL SRLFEPLYRQ LGLVNGALQA GQVLPAQYDA FSRLKETAAR QPEPVRGIML DLVSSGSTMT TRESGALLNR GAAGATKMVC DQGFTGRYPM RRGAQADAGV EDFERLFSAQ GLMATYFRDH LAAYVDTSAK PWQALRSNGG PNGMVSQSVL NSYETAERIR GAMLDDSGHL RVSTVLRFID MDSQLSEAQL SVAGQTVRFA HGVTSPHRVD WTNQNTQLAI KLQLKSVDGR MTTLQFDGPW ALFRFFDAGQ AVGGTGTADR RERLYQTSLG TVRIEWQALT LPSPIWSGIL QSFRCPS
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