| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A1668 |
|---|
| Symbol | |
|---|
| ID | 4890228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 1605669 |
|---|
| End bp | 1607630 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640147933 |
|---|
| Product | ImpA-related N-terminal family protein |
|---|
| Protein accession | YP_001078851 |
|---|
| Protein GI | 126447767 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.894506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATGA GCGAACGGCG CCCGCCCGGC GGCGCGGCGG CGCGCGCGCG CATGCCGATC
GATGTCCAAG CGCTCGCCGT GCTGGGGCGC ACGGACATCG ATTCCGCCAT GCCCGCGGGC
GCCGACGTGC GCGCCGACGC GAGGTTCGAC GCGCTGCACG CGGAGCTTGC GAAGCTCGCG
TCGCCGGGCG CGAGCGGGCA AGTCGATTGG CGCGCGGCGA CGCATCTCGC CGCCGAATTG
CTGCGCGAGC GCGGCAAGGA TTTGCTCGTC GGCTGCTATC TGGCGGGTGC GTTGCTGCAG
ACGGGCGGCG CGGCGGGGCT GCGCTGCGGA CTCGAAATCG TCGGCGATCT CGTCGAACGT
CATTGGGATG CGATGTCGCC GCCCGTGTCG CGGATGCGGG CGAGGCGCGG GGCGCTGCAA
TGGCTGGTCG ATCGCGTCGA CGCCATGCAC GATGCAGGAG CCGCGGCATG CGGCGGCGCG
TGCTCGGCCG AACTGGTCGC GCAATTGCGC GCGGCCGCGC GGCGCATCGA TGCGCTGCTC
GCCGAGCGCG ACGACGACGC GCCGACGATG CGCGCGGTGC ATGCGTTCGC GGAGCGATTG
CCTGTTGAGG TGGTTGAGGT GGTGGAAGTG GCTGACGAGG CTGATGTGGC TGAGGCGGCT
GAGGCGGCTG AGGCGGCTGA GGCGGCTGAG GCGGCTGAGG CGGCTGAGGC GGCTGAGGCG
GCTGAGGCGG CTGAGGCGGC TGAGGCGGCT GATGTGGCTG ATGTGGCTGA TGTGGCTGAT
GTGGCTGATG TGGCTGATGT GGCTGATGTG GCTGAGACGG CCGAGGCCGA TGCGCACGGC
TCGACGGGAG GGCCGGCCGC GGAAATCGCG ATTGCCGCCG CCGAACAGGC TTTGATTGAT
CCGGCCGGTC GAGCCGCGCC GAGCGCCGGC ACGGATACGA ACGCGAACGC AGACGCCGCC
AGGCAACCGG CGCGGCTCGA CGAAGCGGCC GGCCGCGACC GCGCGCTCGC CGATGCGCTC
GCGCAATTGC ATTGCGTCGC GACGGCGTTC GCGCAAGCGG ACTGGGCCGA CGCGCGCGGC
TTCCGGCTGC GCCGCGTCGC GTGCTGGTCG AGCGTGTGTG CGCTGCCGGA AACGGACGCG
GAGAACGGAA GAACGCGGAT CGCCGCGCCG AGCGCTTCGA TCGTCGGCGC GGCGAAGAAC
ATCGACGAGG ATGGCGAGCC CGTGGCGGCG GTGCGCTTCG CCGAAGCGCA TGCGCAGGCG
TTCCCGCTCT GGCTGGATTT GCAGCGCATC GCCGCGCGCG CGCTCGCGCG CGCGGGAGGC
GACGGCGCCG ATGCGCGGCG CGAAGTGGAG ACGGCGGTTC GTGCACTGCT TGCGCGGCTG
CCGGGCCTCG ACGCGCTGAC GTTCGCGGAC GGCACGCCGT TCGCCGACGA CGCGACGCGC
GCATGGCTCG GCGAGCTTGG CGCGCCTGTT GTGGCGGCGG ATGCGGTGTC GCCGTCGTCT
TTGCCGCTTT CGCCGCGACC TTCGCCGCCT GAGCGATCGT CGCCGATGGC GGGCGAACCG
GCGCGCGCGC CGGGCGATGC GTGCGGGGCG AGCGCCGACG ATGCAGTGGA CCGAGCGTGC
GCGTTTGCCG CGAGCGGCCA GCTCGATCTC GCGCTCCACG CGATTCAGCA TGCGATCGAT
CGTGCGACGA GCGCCGAACA GCGGTTGAGA GCGCGCGTGC GGTTGTGCGA GCTTGCGCGC
GACCATTGGC CGCATGAGGT TCCTGAGGCG TTCGCGCGCG GCGTGATCGA ACCGATTCGG
CGGCACGATT TGCTCGCATG GAATCCGGAG CTGGCGCTCG ACGGCTTGTC GGCCGCCTAT
GCGCTGCTGA TTCGGCGCGA TCGCGAATCG GCGCACGCGA GGACGGTGCT TGACGAGATC
GCGAGCGTCG ACGCGGCGCG GGCCATGCGT TTGTCGATGT GA
|
|---|
| Protein sequence | MGMSERRPPG GAAARARMPI DVQALAVLGR TDIDSAMPAG ADVRADARFD ALHAELAKLA
SPGASGQVDW RAATHLAAEL LRERGKDLLV GCYLAGALLQ TGGAAGLRCG LEIVGDLVER
HWDAMSPPVS RMRARRGALQ WLVDRVDAMH DAGAAACGGA CSAELVAQLR AAARRIDALL
AERDDDAPTM RAVHAFAERL PVEVVEVVEV ADEADVAEAA EAAEAAEAAE AAEAAEAAEA
AEAAEAAEAA DVADVADVAD VADVADVADV AETAEADAHG STGGPAAEIA IAAAEQALID
PAGRAAPSAG TDTNANADAA RQPARLDEAA GRDRALADAL AQLHCVATAF AQADWADARG
FRLRRVACWS SVCALPETDA ENGRTRIAAP SASIVGAAKN IDEDGEPVAA VRFAEAHAQA
FPLWLDLQRI AARALARAGG DGADARREVE TAVRALLARL PGLDALTFAD GTPFADDATR
AWLGELGAPV VAADAVSPSS LPLSPRPSPP ERSSPMAGEP ARAPGDACGA SADDAVDRAC
AFAASGQLDL ALHAIQHAID RATSAEQRLR ARVRLCELAR DHWPHEVPEA FARGVIEPIR
RHDLLAWNPE LALDGLSAAY ALLIRRDRES AHARTVLDEI ASVDAARAMR LSM
|
|---|
| |