Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0985 |
Symbol | |
ID | 4890286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 932441 |
End bp | 934891 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640147258 |
Product | haemagluttinin family protein |
Protein accession | YP_001078177 |
Protein GI | 126447035 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport [W] Extracellular structures |
COG ID | [COG5295] Autotransporter adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.205403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGCGG TTTCTGAATT TTCCCGGTCG AATGGCAAGT GTTCGACGAC GCAGGTCGTC ACGGCGGCGC CGGGCGTTGC CGGTCGTACC GCGGCTTCTG GCCGATCGCG CCCGTCGTGG ACGAAGCTCG GGCTGATGTC GCTGGCGGTG AGCGCGGCGA TGGGCTGCAT GGCGACCGAC GCCGCGGCGC AGGTCAGCTA TGCGGCGGGC GAGAACGCCT ATGCCGGCCC CGGCGGCAAT ACCGGCCCGT GGGCGTTCTA CAACCCGGCC TTCAGCGCGG GCACGCTGCT GTACGGCACC GCGGTCGGCA ACTACGCCTA TGCGAACGGC GAGGGCAGCT CGGCCTACGG CGATCACGCG ACGGTGAAGG GGCGCATCGG CTCCGCGTTC GGCGCGTATT CGGAAGCGGC GGGCGACGGC AGCACTGCAA TCGGCGCCAG CGCGCGGGCG CTGCCGGACT TCAGCATCGC GATCGGCACG AACGCGCAGG CGCTGAAGGA CACGGGCCAA TCGATTCCCG GCCGCGAAGA CATCGGCACG ATCGCGATCG GCGCGGGCGC GCTCGCGCAG GGCGACAACA GCGATCCGCT GCACGTGTCC GCGCCGAACG CGTTCGGCGG CTATTCGAGC GCGACGGCAA GCGGCGCGGT GGCGCTGGGC GAAGGCGCCG CATCGTCCGG CTATTACGCG AACGCGCTCG GCTCGTATTC GAAGGCGTCG GGTGCGGGTG CGGTCGCGGT GGGCGGCGGC GCGCAAGCGA GCGCGCAAGG CGCGGTGGCG ATCGGCGGCG CGACGAGCGT CGACAACGCA ACCGCGCTGT CCGGCTACGC GAGCGCAAGC GGCGTCAACG CGATCGCGAT CGGTTCCGGC GCGCAGGCGA CGGGCGCCCG GTCGATCAGC ATCGGCACGG GCAACGTCGT GTCGGGGGCG AGCTCGGGCG CCTTCGGCGA TCCGTCGACG GTCACGGGCA CGGGCTCGTA TTCGTTCGGC AACAACAACA CGATCAATTC GAACAACGCG TTCGTGCTCG GCAACAACGT GACGATCGGC CCAGGGTTCG ACGGCTCGGT CGCGCTCGGT AGCGGCACGA CGCTCGCCGC GGCGAACCCC ACCGGCAGCG CGACGATCAC GACGAGCTCG GGCGGCCAGT TGACGCTGTC CGGCTTCGCC GGCGCGAATC CGACGAGCGT CGTCAGCGTC GGCGCGCCCG GCGCCGAGCG CCAGATCACG AACGTCGCGG CGGGGCGCAT CACGCCGACG TCGACGGATG CCGTCAACGG CAGCCAGCTG TATGCGGTCG CGAGCACGAT CGACAATGCG GTGAACGGCG GCGGGATCAA GTACTTCCAC GCGAATTCGA CCCTGGCCGA TTCGACGGCG GCGGGCACGG ACAGCGTCGC GGTCGGGCCG GCCGCGCTCG CCTACGGCAA CGATTCGATC GCCGAAGGCA CGAACGCGAC GGCGGGCGTG AGCGGCAATC CGGCGGTGGC GGGCGATGTC GCGCTCGGCA GCGGCGCGCA GGCGACGGGA GGCCGCTCGC TCGCGCTCGG CGCGAACGCG TCGGTCAACA CGGCGGGCGG CGTGGCGCTC GGCGCCGGCT CGGTCGCGAA CCGCGCGGCC GGCACGTACA CCGATCCGAT CACGGGCAGC AGCTTCACGA CCGCATTCGG CGCGGTGTCG GTCGGCCTCG AGGGTTCGCT GCGCCAGATC ACCAACGTCG CGGCGGGCAC GCAGGCAACG GATGCGGTAA ACGTCGGTCA GTTGCAAGGC GCGATTGCGC AGTTGAATCA GACGATCCAG AACATCACGA ACGGCTCCAA CTCGGGCAAC ACCGGCAATA ACGGCAACAA CACCGGGCAG ACCGTGTCGG GCCAGTGGAT CACGGGCAAC CCGTCGACCT ATACGCCGCC CGTGGCGAGC GGCATCGGCT CGACCGCCGC GGGCAGCGGC AGCGTGGCGT CCGGCGCGAA CAGCGTCGCG ATCGGCGACG GCGCGTCGGC CTCCGGCAAC AACTCGGTGG CGCTCGGCGC CCATTCGGTC GCGAGCGCGC CGAACACGGT GTCGGTCGGC TCGGTCGGCA ACGAGCGGAC GATCTCGAAC GTCGCGCCGG GCGTGAACGG CACCGATGCG GTGAACGTGA ACCAGTTGAA CAGCGGTATC GGCAATGCGG TCGGCCAGGC GAATCAGTAC ACGGATCAGA AGGTCGACCA TCTGCGGCGC GAGATGAACG GCGGCGTGGC TGCGGCGATG GCCGTGGCGG GCTTGCCGCA GCCGACCGCG CCCGGCAAGA GCATGGTCGC GATCGCCGGC TCGACGTGGC AGGGGCAGCA GGGCTTCGCG CTTGGCGTAT CGACGATTTC CGAGAACGGC AAGTGGCTGT ACAAGGGCTC GCTCACGACC AGCACGCGCG GCGGCACGGG CGCGGTGCTC GGGGCCGGTT ATCAGTGGTG A
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Protein sequence | MIAVSEFSRS NGKCSTTQVV TAAPGVAGRT AASGRSRPSW TKLGLMSLAV SAAMGCMATD AAAQVSYAAG ENAYAGPGGN TGPWAFYNPA FSAGTLLYGT AVGNYAYANG EGSSAYGDHA TVKGRIGSAF GAYSEAAGDG STAIGASARA LPDFSIAIGT NAQALKDTGQ SIPGREDIGT IAIGAGALAQ GDNSDPLHVS APNAFGGYSS ATASGAVALG EGAASSGYYA NALGSYSKAS GAGAVAVGGG AQASAQGAVA IGGATSVDNA TALSGYASAS GVNAIAIGSG AQATGARSIS IGTGNVVSGA SSGAFGDPST VTGTGSYSFG NNNTINSNNA FVLGNNVTIG PGFDGSVALG SGTTLAAANP TGSATITTSS GGQLTLSGFA GANPTSVVSV GAPGAERQIT NVAAGRITPT STDAVNGSQL YAVASTIDNA VNGGGIKYFH ANSTLADSTA AGTDSVAVGP AALAYGNDSI AEGTNATAGV SGNPAVAGDV ALGSGAQATG GRSLALGANA SVNTAGGVAL GAGSVANRAA GTYTDPITGS SFTTAFGAVS VGLEGSLRQI TNVAAGTQAT DAVNVGQLQG AIAQLNQTIQ NITNGSNSGN TGNNGNNTGQ TVSGQWITGN PSTYTPPVAS GIGSTAAGSG SVASGANSVA IGDGASASGN NSVALGAHSV ASAPNTVSVG SVGNERTISN VAPGVNGTDA VNVNQLNSGI GNAVGQANQY TDQKVDHLRR EMNGGVAAAM AVAGLPQPTA PGKSMVAIAG STWQGQQGFA LGVSTISENG KWLYKGSLTT STRGGTGAVL GAGYQW
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