Gene BMA10247_A0453 details

Gene Information

• Locus tag: BMA10247_A0453
• ID: 4889715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10247
• Kingdom: Bacteria
• Replicon accession: NC_009079
• Strand: +
• Start bp: 397809
• End bp: 398387
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640146730
• Product: hypothetical protein
• Protein accession: YP_001077655
• Protein GI: 126447080
• COG category: [S] Function unknown
• COG ID: [COG3516] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03358] type VI secretion protein, VC_A0107 family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAGCA AGTACAAGGC TTCGGCCAGC GGACAGAAAT TCATCGCGCG CAACCGCGCG 
CCGCGCGTGC AGATCGAGTA CGACGTCGAG ACCTACGGCG CCGAGCGCAA GGTCCAACTG 
TCGTTCGTGA TGGGCGTGAT CGCGGATCTC GCGGGCAAGC GGGCCGAGCC GCTGCCGGAC 
TTGCCGGAGC GCAAGTTCCT CGAAATCGAC GTCGACAATT TCGACGAGCG GATGAAATCG 
ATCGCGCCGC GCGTCGCGTT CCAGGTGCCG AACACGCTGT CGGGAGACGG CATGCTGAGC 
GTCGACATGA CGTTCGAGAG CATCGACGAT TTCTCGCCCG CCGCGATCGC GCGCAACGTC 
GACGCGTTGC GGCGCCTGCT CGACGCGCGC ACCGAGCTGT CGAACCTGCT GTCGTACATG 
GACGGCAAGC ACGGCGCCGA GCAACTGATC GAAAACGCGA TCAACGATCC GGCACTGCTG 
GCCTCGCTCG TGCGGCAGCC GCTCGCGGCG GACGCCGAAG GCGGCGCGCG GCAGCCCGTG 
ACCGGCACCG AAGACGACCC GGAGATTCGC CATGAATGA 

 

Protein sequence

MTSKYKASAS GQKFIARNRA PRVQIEYDVE TYGAERKVQL SFVMGVIADL AGKRAEPLPD 
LPERKFLEID VDNFDERMKS IAPRVAFQVP NTLSGDGMLS VDMTFESIDD FSPAAIARNV 
DALRRLLDAR TELSNLLSYM DGKHGAEQLI ENAINDPALL ASLVRQPLAA DAEGGARQPV 
TGTEDDPEIR HE