| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0165 |
|---|
| Symbol | |
|---|
| ID | 4890195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 136964 |
|---|
| End bp | 140203 |
|---|
| Gene Length | 3240 bp |
|---|
| Protein Length | 1079 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640146445 |
|---|
| Product | RND efflux system, cytoplasmic membrane extrusion protein |
|---|
| Protein accession | YP_001077371 |
|---|
| Protein GI | 126447286 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.243814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGC CGAGCGTCGT TCGTTTTTCC GACGTCAGCC TGCGCTACGG CAAGACCGTC
GCGCTCGAGC GGATCACGCT CGAGATCCCG GCCGGTCTCA CGATCGGGCT GATCGGGCCG
GACGGCGTCG GCAAATCGAG CCTGCTCGCG CTCGCGGCCG GCGCGCGCGC GCTGCAGACG
GGCGCGGTCG ACGCGCTCGG CGGCGACATG CGCTCGCGCC GCCATCGCGA GCGCGTGTGC
CGGCGCATCG CGTACATGCC GCAGGGGCTC GGCAAGAACC TGTATCCGAC GCTCTCCGTC
GAGGAAAACC TGCAGTTCTT CGCGCGCCTG TTCGGCCACG ACGCCGACGA GCGCCGCCGC
CGGATCGACG CGCTCACGCG GAGCACCGGC CTCTTTGCGT TCCTGTCGCG GCCCGCGGGC
AAGCTCTCGG GCGGGATGAA GCAGAAGCTC GGCCTATGCT GCGCGCTGAT CCACGATCCC
GACCTGCTGA TCCTCGACGA GCCGACGACC GGCGTTGATC CGCTCGCGCG CGCGCAGTTC
TGGGATCTGA TCGCGCGCAT TCGCTCGGAG CGGCCGGCGA TGAGCGTGAT CGTCGCGACC
GCGTACATGG ACGAGGCGCA ACGCTTCGAC TGGCTGATCG CGATGGACGC GGGCCGCGTG
CTCGCGACGG GCGCGCCCGC CGAGCTGCTC GCGCGCACCG GCTGCGATTC GCTCGAGGCG
GCCTTCATCG CACTGTTGCC CGAAGACGAA CGGCGCGGCC ACAAGCCGGT GACGCTCGAG
CCGCTGCGCG CCGACGCGCA AACCGGCACC GCGATCGAGG CGCGCGGGCT GACGATGCGC
TTCGGCGATT TCACCGCGGT CGATCACGTG AGCTTCCGGA TCCGGCGCGG CGAGATCTTC
GGCTTTCTCG GCTCGAACGG CTGCGGCAAG TCGACGACGA TGAAGATGCT CACCGGCCTG
CTGCCCGCGA CCGAGGGCAC CGCGCAGCTG TTCGGCAAGA CAGTCGATCC GAAGGACATC
AATACGCGCC GGCGCGTCGG CTACATGTCG CAGGCCTTCT CGCTGTATAG CGAACTGACG
GTGCGGCAGA ACCTCGTGCT GCACGCGCGG CTGTTCGGCG TGCCGGCCGC CGAGATCGAC
GCGCGCGTCG ACGAGATGGC GCGCCGCTTC GGCCTCGCCG ACATCTACGA CATGCTGCCG
GACAGCCTGC CGCTCGGGAT GCGGCAGCGG CTGTCGCTCG CGGTGGCGAT GGTGCACAAG
CCGGAGCTGC TGATCCTCGA CGAGCCGACC TCGGGCGTCG ATCCCGTCGC GCGCGACAGC
TTCTGGCAGT TGATGATCGA CCTCGCGCGC CGCGATCGGG TGACGATCTT CATCTCGACG
CACTTCATGA ACGAGGCGCA GCGCTGCGAC CGGATCTCGC TGATGCACGC GGGCCGCGTG
CTCGCGAGCG ATGCGCCGGC GGCGCTCGTG CGCGCGCGCG GCGCGGCGAC GCTCGAGGAG
GCCTTCATCG GCTATCTCGT CGACGCTTCG GCGCAGGAGG CGCAGGAGGC GCAGGGCGGC
GCGGGCGAGC GCCCCGGCGC GGGCGAGCGC GCGGCGGGCG AAAGCGTGGC CGGTCGCGGC
GCGGCGACCG ATGGCGATGC CGACGGCGCG CATGCGCGGC CCGCCGCGTA CGCGAACGGC
GCGGCGCAAC ATCGCGCGCC CGATGCGGAC GCGGCCGGCA CCGACGTCGC CGCCGAGACG
GGCGCACGCG ACGACGCGCG CACCGCACAC GCGGCCGGAC ATTCCGCCGG AAACGACGTA
CGCGCCACGG TGGGCTCCGA AGTCGGCTCC GAAGTCGGCT CCGATGTCGG CTCCGAAGTC
GCCTCCGAAG CCGGCCTCGC AGCCAGCGCC GAAAGCGGCT CCGAACGCGG CGTCGCCCAC
GGCGCCGAAC GTGCACGCGA ACCCGCGGCG GATGCCGGCG CCGCAATCGA CGTCGAACCG
GGCGCGAGCG CGGAATCGGC CACGGCCGCC GTCGCCCCGG CTCGCCACGC CGAATCCGCC
GCCACGTCAC CCCGCGCAGG GAACGCGCCG GCCGGCACGC CGTTCGCCGC CGCGCCGGCC
GAGCCGCCCC ATCGCGCATT CAGCGCGCAG CGCGCGCTCA GCTACATGTG GCGCGAGATG
CTGGAGCTGC GCCGCGATCC CGTTCGCGCG ACGCTCGCGC TGATCGGCTC GCTCGTGCTG
ATGTGCGTGA TCGGCATCGG CATCAGCCTC GACGTCGAGG ATCTGACCTA CGCGGTGCTC
GACCGCGATC AAACCGAGCT GAGCCACGAC TACGCGCTGA ACCTGTCCGG CTCGCGCTAC
TTCGTCGAGC GGCCGCCGAT CGCCGATTAC GCGGCGCTCG ACCGCCGGAT GCGCGACGGC
GAGCTGTCGC TCGCGATCGA GATTCCGCCG AACTTCGCGC GCGACGTCGA GCGCGGCGCG
CCCGCGCAGA TCGGCATGTG GATCGACGGC GCGATGCCGC AGCGCGCCGA GACGATCCGC
GGCTACGCGA TCGGCATGCA CACGATGTGG CTCGCCGACA AGGCGCGGCA CCGCCTCGGC
GTGACGCTCG CGCCGCGCGC GGAAGTGGTC ACGCGCTACC GCTACAACCC GGACGTGAAG
AGCCTGCCGG CGATGATCCC CGCCGTGATG CCGCTGCTGC TGCTGATGTT GCCCGCGATG
CTCACCGCGC TCGCCGTCGT TCGCGAACGC GAGCTCGGCT CGATCCTGAA TCTGTACGTG
ACGCCCGTCA CGCGCACCGA GTTCCTGATC GGCAAGCAGG TGCCGTACGT CGTGCTGGCG
ATGCTGAACT TCCTGCTGAT GACGATGCTC GCGCGCATCG CGTTCGACGT GCCCGTCAAG
GGCAGCTTCA TGACGCTGCT GCTCGCGGTG CTGATCTTCA ACGTCGTCGC CACGGGCATC
GGCCTGCTCG CGTCGACGTT CACGCGCAGC CAGGTGGCCG CGATCGTGAT GACGATCATC
GGCACGATGA TCCCGACCGT GCAGTTCGCG GGGCTGCTCA CGCCGCTGTC GTCGCTCGAG
GGCACCGGGC GCTTGATCGG CCTCGTCTAT CCGGCCACCT ACATGCTGTC GATCAGCCGC
GGCGTGTTCA ACAAGGCGCT GTCGCTCCAC GAGCTCTACT CGCAGTTCTG GCCGCTCGCC
GCCTGCGTAC CGGTGATCCT CGGCGCGACC ATACTGCTCT TGAAAAAACA GGAACGCTGA
|
|---|
| Protein sequence | MSAPSVVRFS DVSLRYGKTV ALERITLEIP AGLTIGLIGP DGVGKSSLLA LAAGARALQT
GAVDALGGDM RSRRHRERVC RRIAYMPQGL GKNLYPTLSV EENLQFFARL FGHDADERRR
RIDALTRSTG LFAFLSRPAG KLSGGMKQKL GLCCALIHDP DLLILDEPTT GVDPLARAQF
WDLIARIRSE RPAMSVIVAT AYMDEAQRFD WLIAMDAGRV LATGAPAELL ARTGCDSLEA
AFIALLPEDE RRGHKPVTLE PLRADAQTGT AIEARGLTMR FGDFTAVDHV SFRIRRGEIF
GFLGSNGCGK STTMKMLTGL LPATEGTAQL FGKTVDPKDI NTRRRVGYMS QAFSLYSELT
VRQNLVLHAR LFGVPAAEID ARVDEMARRF GLADIYDMLP DSLPLGMRQR LSLAVAMVHK
PELLILDEPT SGVDPVARDS FWQLMIDLAR RDRVTIFIST HFMNEAQRCD RISLMHAGRV
LASDAPAALV RARGAATLEE AFIGYLVDAS AQEAQEAQGG AGERPGAGER AAGESVAGRG
AATDGDADGA HARPAAYANG AAQHRAPDAD AAGTDVAAET GARDDARTAH AAGHSAGNDV
RATVGSEVGS EVGSDVGSEV ASEAGLAASA ESGSERGVAH GAERAREPAA DAGAAIDVEP
GASAESATAA VAPARHAESA ATSPRAGNAP AGTPFAAAPA EPPHRAFSAQ RALSYMWREM
LELRRDPVRA TLALIGSLVL MCVIGIGISL DVEDLTYAVL DRDQTELSHD YALNLSGSRY
FVERPPIADY AALDRRMRDG ELSLAIEIPP NFARDVERGA PAQIGMWIDG AMPQRAETIR
GYAIGMHTMW LADKARHRLG VTLAPRAEVV TRYRYNPDVK SLPAMIPAVM PLLLLMLPAM
LTALAVVRER ELGSILNLYV TPVTRTEFLI GKQVPYVVLA MLNFLLMTML ARIAFDVPVK
GSFMTLLLAV LIFNVVATGI GLLASTFTRS QVAAIVMTII GTMIPTVQFA GLLTPLSSLE
GTGRLIGLVY PATYMLSISR GVFNKALSLH ELYSQFWPLA ACVPVILGAT ILLLKKQER
|
|---|
| |