Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0165 |
Symbol | |
ID | 4890195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 136964 |
End bp | 140203 |
Gene Length | 3240 bp |
Protein Length | 1079 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640146445 |
Product | RND efflux system, cytoplasmic membrane extrusion protein |
Protein accession | YP_001077371 |
Protein GI | 126447286 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.243814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCGC CGAGCGTCGT TCGTTTTTCC GACGTCAGCC TGCGCTACGG CAAGACCGTC GCGCTCGAGC GGATCACGCT CGAGATCCCG GCCGGTCTCA CGATCGGGCT GATCGGGCCG GACGGCGTCG GCAAATCGAG CCTGCTCGCG CTCGCGGCCG GCGCGCGCGC GCTGCAGACG GGCGCGGTCG ACGCGCTCGG CGGCGACATG CGCTCGCGCC GCCATCGCGA GCGCGTGTGC CGGCGCATCG CGTACATGCC GCAGGGGCTC GGCAAGAACC TGTATCCGAC GCTCTCCGTC GAGGAAAACC TGCAGTTCTT CGCGCGCCTG TTCGGCCACG ACGCCGACGA GCGCCGCCGC CGGATCGACG CGCTCACGCG GAGCACCGGC CTCTTTGCGT TCCTGTCGCG GCCCGCGGGC AAGCTCTCGG GCGGGATGAA GCAGAAGCTC GGCCTATGCT GCGCGCTGAT CCACGATCCC GACCTGCTGA TCCTCGACGA GCCGACGACC GGCGTTGATC CGCTCGCGCG CGCGCAGTTC TGGGATCTGA TCGCGCGCAT TCGCTCGGAG CGGCCGGCGA TGAGCGTGAT CGTCGCGACC GCGTACATGG ACGAGGCGCA ACGCTTCGAC TGGCTGATCG CGATGGACGC GGGCCGCGTG CTCGCGACGG GCGCGCCCGC CGAGCTGCTC GCGCGCACCG GCTGCGATTC GCTCGAGGCG GCCTTCATCG CACTGTTGCC CGAAGACGAA CGGCGCGGCC ACAAGCCGGT GACGCTCGAG CCGCTGCGCG CCGACGCGCA AACCGGCACC GCGATCGAGG CGCGCGGGCT GACGATGCGC TTCGGCGATT TCACCGCGGT CGATCACGTG AGCTTCCGGA TCCGGCGCGG CGAGATCTTC GGCTTTCTCG GCTCGAACGG CTGCGGCAAG TCGACGACGA TGAAGATGCT CACCGGCCTG CTGCCCGCGA CCGAGGGCAC CGCGCAGCTG TTCGGCAAGA CAGTCGATCC GAAGGACATC AATACGCGCC GGCGCGTCGG CTACATGTCG CAGGCCTTCT CGCTGTATAG CGAACTGACG GTGCGGCAGA ACCTCGTGCT GCACGCGCGG CTGTTCGGCG TGCCGGCCGC CGAGATCGAC GCGCGCGTCG ACGAGATGGC GCGCCGCTTC GGCCTCGCCG ACATCTACGA CATGCTGCCG GACAGCCTGC CGCTCGGGAT GCGGCAGCGG CTGTCGCTCG CGGTGGCGAT GGTGCACAAG CCGGAGCTGC TGATCCTCGA CGAGCCGACC TCGGGCGTCG ATCCCGTCGC GCGCGACAGC TTCTGGCAGT TGATGATCGA CCTCGCGCGC CGCGATCGGG TGACGATCTT CATCTCGACG CACTTCATGA ACGAGGCGCA GCGCTGCGAC CGGATCTCGC TGATGCACGC GGGCCGCGTG CTCGCGAGCG ATGCGCCGGC GGCGCTCGTG CGCGCGCGCG GCGCGGCGAC GCTCGAGGAG GCCTTCATCG GCTATCTCGT CGACGCTTCG GCGCAGGAGG CGCAGGAGGC GCAGGGCGGC GCGGGCGAGC GCCCCGGCGC GGGCGAGCGC GCGGCGGGCG AAAGCGTGGC CGGTCGCGGC GCGGCGACCG ATGGCGATGC CGACGGCGCG CATGCGCGGC CCGCCGCGTA CGCGAACGGC GCGGCGCAAC ATCGCGCGCC CGATGCGGAC GCGGCCGGCA CCGACGTCGC CGCCGAGACG GGCGCACGCG ACGACGCGCG CACCGCACAC GCGGCCGGAC ATTCCGCCGG AAACGACGTA CGCGCCACGG TGGGCTCCGA AGTCGGCTCC GAAGTCGGCT CCGATGTCGG CTCCGAAGTC GCCTCCGAAG CCGGCCTCGC AGCCAGCGCC GAAAGCGGCT CCGAACGCGG CGTCGCCCAC GGCGCCGAAC GTGCACGCGA ACCCGCGGCG GATGCCGGCG CCGCAATCGA CGTCGAACCG GGCGCGAGCG CGGAATCGGC CACGGCCGCC GTCGCCCCGG CTCGCCACGC CGAATCCGCC GCCACGTCAC CCCGCGCAGG GAACGCGCCG GCCGGCACGC CGTTCGCCGC CGCGCCGGCC GAGCCGCCCC ATCGCGCATT CAGCGCGCAG CGCGCGCTCA GCTACATGTG GCGCGAGATG CTGGAGCTGC GCCGCGATCC CGTTCGCGCG ACGCTCGCGC TGATCGGCTC GCTCGTGCTG ATGTGCGTGA TCGGCATCGG CATCAGCCTC GACGTCGAGG ATCTGACCTA CGCGGTGCTC GACCGCGATC AAACCGAGCT GAGCCACGAC TACGCGCTGA ACCTGTCCGG CTCGCGCTAC TTCGTCGAGC GGCCGCCGAT CGCCGATTAC GCGGCGCTCG ACCGCCGGAT GCGCGACGGC GAGCTGTCGC TCGCGATCGA GATTCCGCCG AACTTCGCGC GCGACGTCGA GCGCGGCGCG CCCGCGCAGA TCGGCATGTG GATCGACGGC GCGATGCCGC AGCGCGCCGA GACGATCCGC GGCTACGCGA TCGGCATGCA CACGATGTGG CTCGCCGACA AGGCGCGGCA CCGCCTCGGC GTGACGCTCG CGCCGCGCGC GGAAGTGGTC ACGCGCTACC GCTACAACCC GGACGTGAAG AGCCTGCCGG CGATGATCCC CGCCGTGATG CCGCTGCTGC TGCTGATGTT GCCCGCGATG CTCACCGCGC TCGCCGTCGT TCGCGAACGC GAGCTCGGCT CGATCCTGAA TCTGTACGTG ACGCCCGTCA CGCGCACCGA GTTCCTGATC GGCAAGCAGG TGCCGTACGT CGTGCTGGCG ATGCTGAACT TCCTGCTGAT GACGATGCTC GCGCGCATCG CGTTCGACGT GCCCGTCAAG GGCAGCTTCA TGACGCTGCT GCTCGCGGTG CTGATCTTCA ACGTCGTCGC CACGGGCATC GGCCTGCTCG CGTCGACGTT CACGCGCAGC CAGGTGGCCG CGATCGTGAT GACGATCATC GGCACGATGA TCCCGACCGT GCAGTTCGCG GGGCTGCTCA CGCCGCTGTC GTCGCTCGAG GGCACCGGGC GCTTGATCGG CCTCGTCTAT CCGGCCACCT ACATGCTGTC GATCAGCCGC GGCGTGTTCA ACAAGGCGCT GTCGCTCCAC GAGCTCTACT CGCAGTTCTG GCCGCTCGCC GCCTGCGTAC CGGTGATCCT CGGCGCGACC ATACTGCTCT TGAAAAAACA GGAACGCTGA
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Protein sequence | MSAPSVVRFS DVSLRYGKTV ALERITLEIP AGLTIGLIGP DGVGKSSLLA LAAGARALQT GAVDALGGDM RSRRHRERVC RRIAYMPQGL GKNLYPTLSV EENLQFFARL FGHDADERRR RIDALTRSTG LFAFLSRPAG KLSGGMKQKL GLCCALIHDP DLLILDEPTT GVDPLARAQF WDLIARIRSE RPAMSVIVAT AYMDEAQRFD WLIAMDAGRV LATGAPAELL ARTGCDSLEA AFIALLPEDE RRGHKPVTLE PLRADAQTGT AIEARGLTMR FGDFTAVDHV SFRIRRGEIF GFLGSNGCGK STTMKMLTGL LPATEGTAQL FGKTVDPKDI NTRRRVGYMS QAFSLYSELT VRQNLVLHAR LFGVPAAEID ARVDEMARRF GLADIYDMLP DSLPLGMRQR LSLAVAMVHK PELLILDEPT SGVDPVARDS FWQLMIDLAR RDRVTIFIST HFMNEAQRCD RISLMHAGRV LASDAPAALV RARGAATLEE AFIGYLVDAS AQEAQEAQGG AGERPGAGER AAGESVAGRG AATDGDADGA HARPAAYANG AAQHRAPDAD AAGTDVAAET GARDDARTAH AAGHSAGNDV RATVGSEVGS EVGSDVGSEV ASEAGLAASA ESGSERGVAH GAERAREPAA DAGAAIDVEP GASAESATAA VAPARHAESA ATSPRAGNAP AGTPFAAAPA EPPHRAFSAQ RALSYMWREM LELRRDPVRA TLALIGSLVL MCVIGIGISL DVEDLTYAVL DRDQTELSHD YALNLSGSRY FVERPPIADY AALDRRMRDG ELSLAIEIPP NFARDVERGA PAQIGMWIDG AMPQRAETIR GYAIGMHTMW LADKARHRLG VTLAPRAEVV TRYRYNPDVK SLPAMIPAVM PLLLLMLPAM LTALAVVRER ELGSILNLYV TPVTRTEFLI GKQVPYVVLA MLNFLLMTML ARIAFDVPVK GSFMTLLLAV LIFNVVATGI GLLASTFTRS QVAAIVMTII GTMIPTVQFA GLLTPLSSLE GTGRLIGLVY PATYMLSISR GVFNKALSLH ELYSQFWPLA ACVPVILGAT ILLLKKQER
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