Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A3057 |
Symbol | |
ID | 4904176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2973132 |
End bp | 2974385 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640146160 |
Product | major facilitator family transporter |
Protein accession | YP_001077086 |
Protein GI | 126457013 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCAC CCGAAACGCA TCGACGCGAC GGATCCCCAC GTTTTTTCAA TCCGATGATG ATCGCCGTGG TCGCCGGCGC GCTCGTGATG AGCGCGGCAA TGGGCGTGCG GCAAACCTTC GGCCTTTTCA TCGGGCCATT CTCGTTCGAC CACGGTTTGC CGGTGACGAC GATCGCGTTC GCGATCGCGC TGCACAACCT CGTCTGGGGC GCCGCGCAGC CGTTCGCCGG CGCGGCCGCC GACCGCTACG GCGCCGGGCC GCTCGTCGCG ATCGGCGCGG TCGTGTTCGC GCTCGGCCTC GCGATCGCCG CGGTCGTGCC GACGGGCCCG ATGCTCGTGC TCGGCATAGG CGTGCTCGTC GGCATCGGGA TCAGCTGCAC GAGTTTCGGC GTGGTGCTGA CCGCGGTCGG CCGCGGCGCG CCTGCCGAGA AGCGCAGCAT GGCGATGGGC ATCGCGAGCG CGGGCGGCTC GCTCGGCCAG GTGGCGCTCG TGCCGATCGC GCAGTGGTTC ACGTCGCATT CGGGCACGAT GGTGTCGCTG TTCGTGCTGG CCGGCTGCAT GATCGCGATC GCGCCGCTCG GCGTGCTGCT CGACAAGAAC ACGCGCGGCA GCCACGTGGT CGCGCACGAG ACGGCGACGA TATCGCTGAA GGAGACGCTG TCGTACGCGG TGCGGCATCG CGGCTATTGC CTGCTGACGC TCGGCTTCTT CACCTGCGGG TTCCAGCTCG CGTTCATCGG CACGCACTTG CCGAACTATC TGCTGCTCTG CCACATGCCG GCCGGGCTCG GCGCGACCGC GCTCGCGCTG ATCGGCCTGT TCAACATGGC GGGCAGCTGG GCGTGCGGCT GGCTCGGCGG GCGCTACCGG CAGCAGCACG TGCTCGGCTG GCTGTACCTG ATTCGCGGCG CGGCGATCGC GCTGTTCTTC CTCGGGCCGA AGTCGAATGC GTCGGTCGTC GTCTTCGCGG CGATCATGGG GCTCACGTGG CTCGGCACCG TGCCGCTCAC GAGCGGGCTC GTCGCGAAGG TGTTCGGCAC GCGGCATCTG GGCACGCTGT TCGGCGTGTG CTTCCTGAGC CATCAGGTCG GCTCGTTCCT CGGCTCGTGG CTCGGCGGCT ACGTGTTCGA CGCGACGGGA TCGTATTCGC TGATCTGGGG CGCGACGGCG CTCGCCGGGC TGTTCGCGGC ACTGCTGCAT TTCCCGATCA ACGACGCGCC CGCGCATGGC GGCGCGGCCG TCGCGCGGGC TTGA
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Protein sequence | MFAPETHRRD GSPRFFNPMM IAVVAGALVM SAAMGVRQTF GLFIGPFSFD HGLPVTTIAF AIALHNLVWG AAQPFAGAAA DRYGAGPLVA IGAVVFALGL AIAAVVPTGP MLVLGIGVLV GIGISCTSFG VVLTAVGRGA PAEKRSMAMG IASAGGSLGQ VALVPIAQWF TSHSGTMVSL FVLAGCMIAI APLGVLLDKN TRGSHVVAHE TATISLKETL SYAVRHRGYC LLTLGFFTCG FQLAFIGTHL PNYLLLCHMP AGLGATALAL IGLFNMAGSW ACGWLGGRYR QQHVLGWLYL IRGAAIALFF LGPKSNASVV VFAAIMGLTW LGTVPLTSGL VAKVFGTRHL GTLFGVCFLS HQVGSFLGSW LGGYVFDATG SYSLIWGATA LAGLFAALLH FPINDAPAHG GAAVARA
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