Gene BURPS1106A_A3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A3057 
Symbol 
ID4904176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp2973132 
End bp2974385 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID640146160 
Productmajor facilitator family transporter 
Protein accessionYP_001077086 
Protein GI126457013 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAC CCGAAACGCA TCGACGCGAC GGATCCCCAC GTTTTTTCAA TCCGATGATG 
ATCGCCGTGG TCGCCGGCGC GCTCGTGATG AGCGCGGCAA TGGGCGTGCG GCAAACCTTC
GGCCTTTTCA TCGGGCCATT CTCGTTCGAC CACGGTTTGC CGGTGACGAC GATCGCGTTC
GCGATCGCGC TGCACAACCT CGTCTGGGGC GCCGCGCAGC CGTTCGCCGG CGCGGCCGCC
GACCGCTACG GCGCCGGGCC GCTCGTCGCG ATCGGCGCGG TCGTGTTCGC GCTCGGCCTC
GCGATCGCCG CGGTCGTGCC GACGGGCCCG ATGCTCGTGC TCGGCATAGG CGTGCTCGTC
GGCATCGGGA TCAGCTGCAC GAGTTTCGGC GTGGTGCTGA CCGCGGTCGG CCGCGGCGCG
CCTGCCGAGA AGCGCAGCAT GGCGATGGGC ATCGCGAGCG CGGGCGGCTC GCTCGGCCAG
GTGGCGCTCG TGCCGATCGC GCAGTGGTTC ACGTCGCATT CGGGCACGAT GGTGTCGCTG
TTCGTGCTGG CCGGCTGCAT GATCGCGATC GCGCCGCTCG GCGTGCTGCT CGACAAGAAC
ACGCGCGGCA GCCACGTGGT CGCGCACGAG ACGGCGACGA TATCGCTGAA GGAGACGCTG
TCGTACGCGG TGCGGCATCG CGGCTATTGC CTGCTGACGC TCGGCTTCTT CACCTGCGGG
TTCCAGCTCG CGTTCATCGG CACGCACTTG CCGAACTATC TGCTGCTCTG CCACATGCCG
GCCGGGCTCG GCGCGACCGC GCTCGCGCTG ATCGGCCTGT TCAACATGGC GGGCAGCTGG
GCGTGCGGCT GGCTCGGCGG GCGCTACCGG CAGCAGCACG TGCTCGGCTG GCTGTACCTG
ATTCGCGGCG CGGCGATCGC GCTGTTCTTC CTCGGGCCGA AGTCGAATGC GTCGGTCGTC
GTCTTCGCGG CGATCATGGG GCTCACGTGG CTCGGCACCG TGCCGCTCAC GAGCGGGCTC
GTCGCGAAGG TGTTCGGCAC GCGGCATCTG GGCACGCTGT TCGGCGTGTG CTTCCTGAGC
CATCAGGTCG GCTCGTTCCT CGGCTCGTGG CTCGGCGGCT ACGTGTTCGA CGCGACGGGA
TCGTATTCGC TGATCTGGGG CGCGACGGCG CTCGCCGGGC TGTTCGCGGC ACTGCTGCAT
TTCCCGATCA ACGACGCGCC CGCGCATGGC GGCGCGGCCG TCGCGCGGGC TTGA
 
Protein sequence
MFAPETHRRD GSPRFFNPMM IAVVAGALVM SAAMGVRQTF GLFIGPFSFD HGLPVTTIAF 
AIALHNLVWG AAQPFAGAAA DRYGAGPLVA IGAVVFALGL AIAAVVPTGP MLVLGIGVLV
GIGISCTSFG VVLTAVGRGA PAEKRSMAMG IASAGGSLGQ VALVPIAQWF TSHSGTMVSL
FVLAGCMIAI APLGVLLDKN TRGSHVVAHE TATISLKETL SYAVRHRGYC LLTLGFFTCG
FQLAFIGTHL PNYLLLCHMP AGLGATALAL IGLFNMAGSW ACGWLGGRYR QQHVLGWLYL
IRGAAIALFF LGPKSNASVV VFAAIMGLTW LGTVPLTSGL VAKVFGTRHL GTLFGVCFLS
HQVGSFLGSW LGGYVFDATG SYSLIWGATA LAGLFAALLH FPINDAPAHG GAAVARA