| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2903 |
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| Symbol | oppA |
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| ID | 4905836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2835519 |
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| End bp | 2837183 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640146006 |
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| Product | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein |
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| Protein accession | YP_001076932 |
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| Protein GI | 126457737 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCCGCG CGTTGCCATT CCGCTACCAC TATCAATCGC ACACGATGAA ACACACGCAT
GCCTTCGCGG CCGTGCTGGC CGCGCTCGCC CTGACGATCG CGCCATCCGC CCCGGCCGTC
ACCGTTGCCT CGAATGTCAC GCTCGCGGAT CAGCAGGACC TCACGCGGCA GGTGCCCGCG
GAGGTCGAAT CGCTCGACCC CGCGCACATC GAATCGTGGA CCGGCAACAC GATCGGCCTG
GATCTGTTCG AGGGGCTCGC GCGCATCGAC GCGAGCGGGG CGGTGGTGCC GGGCGTCGCG
CAGGCGTGGG AGCACAAGGC GCCGGATACG TGGATCTTCA AGCTGCGCCG CGACGCGAAG
TGGAGCAACG GGCAGCCCGT GACGGCCGCG GATTTCGTAT ACGCGTGGCA GCGTCTCGCC
GATCCGAAGA CGGGTTCGAA ATACACGATC CTCGTCGAGT TCGTGAAGAA CGCCTCGGCG
ATCATCGCGG GCAAGCAGCC GCCCGGCGAT CTCGGCATTC GCGCGATCGA TCCGTACACG
ATCGAGGTGA AGACCGAGGT GCCCGTGTCG TATTTCCCCG AGCTCACCGC GATGGCGCCG
CTCACCCCCG TGAACAAGGA CGCGGTCGCG AAGTTCGGCG ACGCATGGAC GCGCCCGAAG
AACATCGTGA GCAACGGCCC TTACACGCTC GTCGACTGGC AGCCGAACAA CCGGATCGTG
ATGGCGAAGA GCGACAAGTA CTGGAACGCG CGCAACGTCG TGATCCGCAA GGTGACGTAC
CTGCCGATCG AGAACGACGA GACCGCGCTG CGGATGTACC AGGCGGGCCA GATCGACTAC
ACGTATTCGA TTCCCGCGGG CGGCTTCGGC CAGATCAGCA AGCAGTTCGG CAAGGAGCTG
CGCCCGGGGC TGCAGCTCGC GACGTATTAC TACTACCTGA AGAACAGCGA TCCGGCGCTC
AAGGACAAGC GCGTGCGCGA AGCGCTCGCG ATGGTGCTCG ACCGCGAGAT CCTCACGTCG
AAGATCACGC AGGCGGGCGA AGTGCCGATG TACGGGCTGA TGCCGAAGGG CGTGAAGGGC
GTGCAGCGGC CGTTCACGCC GGACTGGGCG TCGTGGCCGA TGGCGAGGCG CGTCGACTAC
GCGAAGAACC TGCTGAAGCA GGCGGGCCAT GGCGACGCGA ATCCGCTCAC GTTCACGCTG
ACCTACAACA CGAACGACCT GCACAAGAAG GTCGCGCTGT TCGCGGCGTC CGAATGGCGC
ACGAAGCTCG GCGTGACGGC GAAGCTCGAG AACGTCGAGT TCAAGGTGCT GATGAAGCAG
CGCCACGACG GCAAGGTGCA GGTCGCGCGC GACGGCTGGT TCGCCGACTA CAACGACGCG
ATGACGTTCT TCGACCTGAT CCGCTGCGGC AGCTCGCAGA ACACGGTCGG CTACTGCAAC
CCGAAGGTCG ATTCGCTCGT CGCCGAGGCG AACCAGAAGC TCGATGACGG CGCGCGCGCG
GCGCTGCTCA CGCAGGCGCA CGATCTCGCG ATGAACGACT ATCCGATGGT GCCGCTCTTC
CAGTATTCGG CGGACCGCCT CGTGAAGTCG TACGTCGGCG GCTACACGCT GACGAACTAC
ATCGACATGC GCGCCTCGCA GGACATGTAC CTGATCAAGC ACTGA
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| Protein sequence | MRRALPFRYH YQSHTMKHTH AFAAVLAALA LTIAPSAPAV TVASNVTLAD QQDLTRQVPA
EVESLDPAHI ESWTGNTIGL DLFEGLARID ASGAVVPGVA QAWEHKAPDT WIFKLRRDAK
WSNGQPVTAA DFVYAWQRLA DPKTGSKYTI LVEFVKNASA IIAGKQPPGD LGIRAIDPYT
IEVKTEVPVS YFPELTAMAP LTPVNKDAVA KFGDAWTRPK NIVSNGPYTL VDWQPNNRIV
MAKSDKYWNA RNVVIRKVTY LPIENDETAL RMYQAGQIDY TYSIPAGGFG QISKQFGKEL
RPGLQLATYY YYLKNSDPAL KDKRVREALA MVLDREILTS KITQAGEVPM YGLMPKGVKG
VQRPFTPDWA SWPMARRVDY AKNLLKQAGH GDANPLTFTL TYNTNDLHKK VALFAASEWR
TKLGVTAKLE NVEFKVLMKQ RHDGKVQVAR DGWFADYNDA MTFFDLIRCG SSQNTVGYCN
PKVDSLVAEA NQKLDDGARA ALLTQAHDLA MNDYPMVPLF QYSADRLVKS YVGGYTLTNY
IDMRASQDMY LIKH
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