| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2808 |
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| Symbol | |
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| ID | 4904131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2745746 |
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| End bp | 2747950 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640145911 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001076837 |
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| Protein GI | 126457833 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCGCG TATTCACACT CGACAGCCCG CACGGCGACG GCCTGAAATT CCACACGCTC
GACGGCAGCG ACGAACTCGG CCGGCTGTTC GAATTCCGGA TCGAGGCGCT CGCCGACAGT
CACAGCCTGT CGCTGAAGGA CCTGCTCGGC AAGCCCGTCA CCGTCCGGAT CGAACAGCAG
GGCCAGTCGA CGCGCTACCT GAACGGCATC GTTGCGCGCG CATCGCTTGC CGGCCGGCGT
GCCGAGCGGT ACTACGGCTA CGAGCTGCTC GTGCGGCCAT GGCTGTGGCT CGCGACGCGT
CGCTCCGATT GCCGGATATT CCAGAACAAG ACCGTGCCCG AGATCGTGCA GGAGGTGCTG
TCGACGTACG GCTTTCCGAT CGAGAACCAC CTCGCCGAAT CGTATGTGCC GCGCGAGTAT
TGCGTGCAGT ACAACGGGAC CGATGCCGCG TTCGTGTCGC GGCTGATGGA ATTCGAGGGC
ATCTACTACT GGTTCCGGCA TGCCGAGGAC ACGCATACGC TGATGCTGAG CGACGCGATG
TCGTCGCATA CGGCGCTGCC CGGCTACGAA ACGATTCCGT ACATCGCGCG CGACCGCACC
GTGATCGCCG ACGTGGAACA TATCGACGGC TGGCTGCCCG CGCGACAGGT GAGCGTCGGC
AAGCATCAGA CCACCGACTA CGACTACACG AAACCACGCG CCGATCTGTC GTCGCAGAAG
GTCGATCCGC GCGGCCACGA TCACGACAGC TTCGCGTCGT TCGAATGGCC GGGCGGCTAT
CGCGACGATG CGCCCGGCGC GCACTACAGC CGCGTGCGGC TCGAAGAACA GCAGGCCGAG
CACGAACGCG CGAGCGCCGA TACGGATGTG CGCGGCGCCG CGCCGGGGTA TCTGTTCACG
CTCGCGCATT GCCCGCGCGC CGACCGGAAC CGCGAGTACC TGATCGTGCG GTGCCAGTAC
CGTTTTCAGG AGAACGCGTA TGCGAGCGAT CAGGGCACGG AGGCTGTGGT GCATCAGACG
ATGATGCTCG TGCGGCCGTC GAGTTTGCCT TATCGGTCGC CGCGTGAGAC GCCGAGACCG
CGGACCAACG GGCCGCAGAC GGCGACCGTT GTCGGGCCGC CCGGTGAGGA AATCTGGACC
GATCAGTACG GGCGCGTGAA GCTGCAGTTT CGCTGGGACA GGTATGGGCA GAGCAACCAG
GATTCGTCGT GCTGGGTGCG GGTGTCGAGC CCGTGGGCGG GCGGTGGATT CGGAGGCGTG
CAGATTCCGC GTGTGGGCGA CGAGGTCGTG GTCGATTTTC TGAACGGCGA TCCGGATGAG
CCGATCGTGA CGGGGCGCGT TTATAACGGC GAGCGGATGC CGCCGTGGGG GCTGCCGGGG
AGTGCGACGC AGAGCGGGCT GTTGTCGCGG TCGTCGCCGG GCGGGACGAC CGAGCATGCG
AACGCGTTTC GCTTCGAGGA CAAGAAAGGC GCGGAACAGT TGTGGATGCA CGCGGAGCGG
AATTTCGACG CGGAAACGGA GGCCGATCAT TCGCTTTCCA TCGAGCACGA CCACACGCAT
ACGGTCGGCA ACGACGAAAC GATGCAGGTG AGGAACAACC GGCAACGCAG CGTCGGGCAG
GACGAGACGG TGAACATCGG GCGGCATCGG GTCGCGCAGA TCAAGGGGAA TGAGACGCAG
GGGGTGGTGG GGGATCGCAC GCGCACGGTC GGGAAGAAGG AGACCGTGAC GATCGTGTCG
GATCGCGAGG CGACGATCGG CGGCAATCAC ATGGAGACGG TCGTGAAAGA CAAGACCGAA
TCGATCGGCG AGGGCAAGAC GCTGAATGTC GTCAAGCACT ATCAGACGAA TTCGAAAAGC
ATGAAGACGA CGGTCGCTGA ACATCATGTG GAGGAGATCG GTGAGCGGAC GTCGACGATT
GCACACGCGC ATAAGCTCAC GGTCCGCGGC GAACACGCCG TCAGCGTCGG CGCAAACCAC
ACGACGAACG TGCAGCATCA GGTGCTCGTC AATGCCGGCG ACCAGCGTGC GCTCGTGTGC
GGGAAGTCGA GCGTCCTGAT GAAGAGCGAC GGCACGATCC TGATCCAGGG TGTCAACGTC
GAATCAAGCG GCTCCGACAG CCACAGCGTG CGCGGCAAGA AGGTCACGTC ATCGGCGTCG
GTCGAGCATA CGGTCGAAGG GACCGTGTTG AAGCTGAATC CGTAA
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| Protein sequence | MSRVFTLDSP HGDGLKFHTL DGSDELGRLF EFRIEALADS HSLSLKDLLG KPVTVRIEQQ
GQSTRYLNGI VARASLAGRR AERYYGYELL VRPWLWLATR RSDCRIFQNK TVPEIVQEVL
STYGFPIENH LAESYVPREY CVQYNGTDAA FVSRLMEFEG IYYWFRHAED THTLMLSDAM
SSHTALPGYE TIPYIARDRT VIADVEHIDG WLPARQVSVG KHQTTDYDYT KPRADLSSQK
VDPRGHDHDS FASFEWPGGY RDDAPGAHYS RVRLEEQQAE HERASADTDV RGAAPGYLFT
LAHCPRADRN REYLIVRCQY RFQENAYASD QGTEAVVHQT MMLVRPSSLP YRSPRETPRP
RTNGPQTATV VGPPGEEIWT DQYGRVKLQF RWDRYGQSNQ DSSCWVRVSS PWAGGGFGGV
QIPRVGDEVV VDFLNGDPDE PIVTGRVYNG ERMPPWGLPG SATQSGLLSR SSPGGTTEHA
NAFRFEDKKG AEQLWMHAER NFDAETEADH SLSIEHDHTH TVGNDETMQV RNNRQRSVGQ
DETVNIGRHR VAQIKGNETQ GVVGDRTRTV GKKETVTIVS DREATIGGNH METVVKDKTE
SIGEGKTLNV VKHYQTNSKS MKTTVAEHHV EEIGERTSTI AHAHKLTVRG EHAVSVGANH
TTNVQHQVLV NAGDQRALVC GKSSVLMKSD GTILIQGVNV ESSGSDSHSV RGKKVTSSAS
VEHTVEGTVL KLNP
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