Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2719 |
Symbol | oxa |
ID | 4903998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2654480 |
End bp | 2655289 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640145822 |
Product | class D beta-lactamase |
Protein accession | YP_001076749 |
Protein GI | 226830803 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.886076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCC GACACGCGCT GTCGAGCGCA TTCGTTTTGC TGGGTTGCAT CGCCGCGTCG GCGCATGCGA AGACGATCTG CACGGCGATC GCCGATGCGG GCACGGGCAA GCTGCTGGTG CAGGACGGCG ATTGCGGCCG CCGCGCATCG CCCGCGTCGA CGTTCAAGAT CGCGATCAGC CTGATGGGCT ACGACGCAGG CTTCCTGCGC AACGAGCATG ACCCGGTGCT GCCGTATCGC GACAGTTACA TCGCGTGGGG TGGCGAAGCA TGGAAGCAGC CGACCGATCC GACGCGCTGG CTCAAGTATT CGGTCGTGTG GTATTCGCAG CAGGTGGCGC ACCATCTCGG CGCGCAGCGC TTCGCGCAGT ATGCGAAGGC GTTCGGCTAC GGCAATGCGG ACGTGTCCGG CGATCCCGGC CAGAACAACG GCCTCGATCG CGCGTGGATC GGCTCGTCGC TGCAGATCTC GCCGCTCGAA CAATTGGAAT TCCTCGGCAA GATGCTCAAT CGCAAGCTGC CCGTGTCGCC CACAGCCGTC GACATGACGG AGCGGATCGT CGAATCGACG ACGCTTGCCG ACGGAACGGT GGTGCACGGC AAGACCGGCG TGTCCTATCC GCTGCTGGCC GACGGCACAC GCGACTGGGC GCGTGGATCC GGCTGGTTCG TCGGCTGGAT CGTGCGTGGC AAGCAGACGC TGGTGTTCGC GCGCCTCACG CAGGACGAGC GCAAGCAGCC CGTTTCAGCC GGCATACGGA CGCGCGAGGC CTTCCTGCGC GACTTGCCCC GGCTTCTCGC CGCGCGCTGA
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Protein sequence | MKFRHALSSA FVLLGCIAAS AHAKTICTAI ADAGTGKLLV QDGDCGRRAS PASTFKIAIS LMGYDAGFLR NEHDPVLPYR DSYIAWGGEA WKQPTDPTRW LKYSVVWYSQ QVAHHLGAQR FAQYAKAFGY GNADVSGDPG QNNGLDRAWI GSSLQISPLE QLEFLGKMLN RKLPVSPTAV DMTERIVEST TLADGTVVHG KTGVSYPLLA DGTRDWARGS GWFVGWIVRG KQTLVFARLT QDERKQPVSA GIRTREAFLR DLPRLLAAR
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