Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2666 |
Symbol | deoC |
ID | 4905628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2604048 |
End bp | 2604830 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640145769 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001076696 |
Protein GI | 126457355 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTT CGTTGAATCG CAACCAGTTG ACCGAAGCGG CGCTCAAGGC GCTGCATCTG ATCGATCTCA CGTCGCTGAA CGACGACGAC ACCGAAGAGA GGATCGCCTC GCTCGCCGCG TCGGCCGATA CGCCGGTCGG CACGCCCGCC GCGCTGTGCG TGTATCCGCG CTTCGTCGGC GCCGCGCATG CGGCGCTCGC GCGGCACGGG CTCGTGCTGC CCGTCGCGAC CGTCACGAAT TTTCCGCACG GCGCGGCCGA TCCGGATGCG GCCGCGCGCG AGACGGCCGA TGCGCTCGCG CGCGGCGCGG ACGAAATCGA TGTGGTGTTT CCGTATCGCG CGCTCATCGA CGGCGACGAA CGGGTCGGCC GCGAGCTCGT CGCGCAGTGC CGCGCGGCGG CGGGCGCGCA GTGCCTGAAG GTGATCCTCG AGACGGGCGA GTTGCGCGAC GCGGCGGCGA TCCGCCGCGC GAGCGAGATC GCGATCGAGG AGGGCGCGGA TTTTCTGAAG ACGTCGACGG GCAAGGTCGC GGTGAACGCG ACGCTCGACG CGGCGGCCGT GATGCTCGCG ACGATCCGCG TCGCGGGCCG CATGGTCGGC TTCAAGGCGG CGGGCGGCGT GCGCACCGCG CAGGACGCGG CGCAGTACCT GTCGCTCGCG CAGCGCGAGC TCGGCCCGGG CTATCTGACG AGCGCGACGT TTCGCTTCGG CGCGTCGGGG CTGCTCGGCA ATCTGCTCGA GACGCTCGGG CACCGGGCAG GCGCGACGCG CGGCGCGTAT TGA
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Protein sequence | MELSLNRNQL TEAALKALHL IDLTSLNDDD TEERIASLAA SADTPVGTPA ALCVYPRFVG AAHAALARHG LVLPVATVTN FPHGAADPDA AARETADALA RGADEIDVVF PYRALIDGDE RVGRELVAQC RAAAGAQCLK VILETGELRD AAAIRRASEI AIEEGADFLK TSTGKVAVNA TLDAAAVMLA TIRVAGRMVG FKAAGGVRTA QDAAQYLSLA QRELGPGYLT SATFRFGASG LLGNLLETLG HRAGATRGAY
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