Gene BURPS1106A_A2129 details

Gene Information

• Locus tag: BURPS1106A_A2129
• Symbol: bpmI
• ID: 4903425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 2083633
• End bp: 2084241
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640145234
• Product: autoinducer synthetase BpmI
• Protein accession: YP_001076162
• Protein GI: 126456405
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism; [T] Signal transduction mechanisms
• COG ID: [COG3916] N-acyl-L-homoserine lactone synthetase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.466862
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATACA TCATCGCGGG CCGATTGAAC GAACTGCCGC CGCACGTCCA GACCGATCTC 
GGCGCGTATC GCTACGACGT GTTCGTGCGC CGGCTCGGCT GGACGATCGC CGGCCACTCG 
CTCGACGAAC ATGCGGAGTG GGACGAGTTC GACGGGCCGT CGACGATTCA TGTCGTCGCG 
CTCGACGACG CGCGCGAGAT CTGCGGCTAC GCACGCCTGC TGCCGACGAC GGGCCCGTAT 
CTGCTGCGCG ACGTGTTTGC GCATCTGCTC GGCTCGTCGC CCGCGCCGCA ATCGCCTGCC 
GTCTGGGAAA TGTCGCGCTT CGCCGCGTCG CGGCGGCGGC GAAGCGCGAC CGAGCGCGAG 
CCGCTCGGCA TGGCGTTCTT TCCGTCGGTG CTCACGGTGG CCGCGTCGCT CGGCGCGACG 
CGCGTGGTCG GCGTGATGAC GCCATCGATC GAACGCCTGT ACCGCCGCTC GGGCATCGCG 
CTGCATCGCC TCGGCAACGC GATGCCGGGC GCGGGCGGCA GCCTGTCCGC ATGCTCGATC 
GATCTGCCGC GCCTCGCGTT CGCGCCGTTG GGCCGCAAGC AGTGCGCGGC GTGCCTGGCG 
ATGCATTGA 

 

Protein sequence

MSYIIAGRLN ELPPHVQTDL GAYRYDVFVR RLGWTIAGHS LDEHAEWDEF DGPSTIHVVA 
LDDAREICGY ARLLPTTGPY LLRDVFAHLL GSSPAPQSPA VWEMSRFAAS RRRRSATERE 
PLGMAFFPSV LTVAASLGAT RVVGVMTPSI ERLYRRSGIA LHRLGNAMPG AGGSLSACSI 
DLPRLAFAPL GRKQCAACLA MH