Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2067 |
Symbol | |
ID | 4904757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 2030244 |
End bp | 2031029 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640145172 |
Product | putative guanine nucleotide exchange factor sopE |
Protein accession | YP_001076100 |
Protein GI | 126457906 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00850265 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTACA ACCCGAGAAT CGGCGGATTC ACGCACGTCA AGCAGGCGTC GTTCGACGTT CACGTCAAGC GCGGCGAAGC GCAGCCGCGC ACGTCGTTCG CACAACAGAT CAAGCGCATC TTCAGCAAGA TCGGCGAAAC GCTCGGGCAA CTGTTCCGCC ACCGCGCGCC GGACAGCGCG CCCGGCCGGG TCAGGCTGCA GGGCGTGCGC TACGTCGGCA GCTATCGGCC CACGGGCGAC GCGAAACAGG CGATCCGGCA TTTCGTCGAC GAAGCGGTCA AGCAGGTCGC CCACACGCGT ACCCCGGAGA TCCGGCAGGA TGCCGAATTC GGCCGGCAAG TCTACGAAGC GACGCTCTGC GCGATCTTCA GCGAAGCGAA GGACCGGTTC TGCATGGACC CGGCCACGCG CGCGGGCAAC GTGCGGCCGG CGTTCATCGA GGCGCTCGGC GACGCGGCGC GTGCGACGGG GCTGCCCGGC GCCGACAAGC AAGGCGTGTT CACGCCGAGC GGCGCCGGCA CGAATCCGCT CTACACCGAG ATCCGGCTGC GCGCCGATAC GCTGATGGGC GCCGAGCTGG CCGCGCGCCC GGAGTATCGC GAGCTTCAGC CGTATGCGCG GCAGCAGGCG ATCGATCTCG TCGCGAACGC GTTGCCGGCC GAGCGTTCGA ACACGCTCGT CGAGTTCCGG CAGACGGTGC AGACGCTCGA AGCCACATAC CGCCGCGCGG CACAAGACGC GTCGCGCGAC GAGAAGGGCG CGACGAACGC GGCGGACGGC GCGTGA
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Protein sequence | MTYNPRIGGF THVKQASFDV HVKRGEAQPR TSFAQQIKRI FSKIGETLGQ LFRHRAPDSA PGRVRLQGVR YVGSYRPTGD AKQAIRHFVD EAVKQVAHTR TPEIRQDAEF GRQVYEATLC AIFSEAKDRF CMDPATRAGN VRPAFIEALG DAARATGLPG ADKQGVFTPS GAGTNPLYTE IRLRADTLMG AELAARPEYR ELQPYARQQA IDLVANALPA ERSNTLVEFR QTVQTLEATY RRAAQDASRD EKGATNAADG A
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