Gene BURPS1106A_A1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1831 
Symbol 
ID4906026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1797982 
End bp1799565 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content70% 
IMG OID640144937 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001075865 
Protein GI126458462 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC CGGCGAGACC GGCGGCGGCC GCGAACGGCG CGGGGGCGCG CGAGCCGGCC 
GCGGCGCGCC CGCTGCGCGG CGCGAAGCTC GCGCTGCTGA CGTTCGCGCT GTCGCTCGCG
ACGTTCATCG AAGTGCTGGA CTCGACGGTG GCGAACGTCG CGGTGCCGGC GATCTCGGGC
AGCCTCGGGG TATCGAACAG CCAGGGCACG TGGGTGATCA GCTCGTACTC GGTGGCTGCG
GCGATCGCGG TGCCGCTGAC GGGCTGGCTC GCGCGGCGGG TGGGCGAGCA GCGGCTGTTC
GTCGCGTCGG TGATTCTGTT CACGCTGACG TCGCTGCTGT GCGGGCTCGC GCGGGACCTG
GAGGTGCTGG TGGCGTGCCG GGCGCTGCAG GGGCTGTTCT CGGGGCCGAT GGTGCCGCTG
TCGCAGACGA TCCTGATGCG CGCGTTTCCG CCGGCGAAGC GCACGCTCGC GCTGGCGCTG
TGGGGGATGA CGGTGCTGCT CGCGCCGATC TTCGGGCCGG TGGTGGGCGG CTGGCTGATC
GACAACTTCT CGTGGCCGTG GATCTTCCTG ATCAACCTGC CGATCGGGCT GTTCTCGTTC
GCGGTGTGCA CGCTGATGCT GCGGCCGCGG GCCTCGCGCG GCGAGGCGAG CCCGATCGAC
GTGCCGGGGA TCGTGCTGCT GGTGATCGGC GTGGGCTCGC TGCAGGCGAT GCTGGACCTG
GGGCATGACC GGGGGTGGTT CGATTCGTCG CTGATCACGG CGCTGGCGAT CGCGGCGGGG
GTGTCGCTCG TGTCGCTGCT GATCTGGGAG CTGGGCGAGG CGCACCCGGT GGTGGAGCTG
AGCCTGTTCC GGGAGCGGAC CTTCACGTTC TGCGTGGTGA TCATCTCGCT GGGGATGATG
AGCTTCTCGG TGGTGGGGGT GGTGTTTCCG CTGTGGCTGC AGGCGGTGAT GGGATACACG
GCGTACCAGG CGGGGCTGGC GACGGCGTCG ATGGGGCTGC TGGCGCTGGT GTTCTCGATC
CTGGTGGGGG TGTATGCGAG CCGGGTGGAC GCACGGGTGC TGGTGACGTT CGGGTTCGGG
GTGTTCGCGG CGGTGATGGG GTGGAGCACG CACTTCACGC TGTCGATGAC GTTCGCGCAG
GTGGTGACGC CGCGGCTGAT CCAGGGGATG GGGCTGCCGT GCTTCTTCAT TCCGCTGACG
GCGGCGACGC TGTCGCGGGT GGCGGACGAC AAGCTGGCGG CGGCGTCGAG CCTGTCGAAC
TTCCTGAGGA CGTTGTCGGC GGCGTTCGGC ACGGCGCTGA GCGTGACGTG GTGGGACAAC
CGGGCGACGT ATCACTACGC GGTGGTGTCG CAGGCGGTGA CGCGGGCCTC GGAGAACACG
CAGCGGTACG TGGACGCGCT GCACGCGATG GGGCTGCACG GCGCGCGCGA GCTGAGCTCG
CTGCACCAGG TGGTGCGGCA GCAGGCGTAC ATGATGGCGA CGAACGACAT GTTCTACATG
GCGAGCGTGA CGTGCGTGCT GCTGGCGGGG CTGATGTGGC TGACGCGGCC GAAGCGGGGC
GCGGCGGCGA CGATGGGGCA TTGA
 
Protein sequence
MSAPARPAAA ANGAGAREPA AARPLRGAKL ALLTFALSLA TFIEVLDSTV ANVAVPAISG 
SLGVSNSQGT WVISSYSVAA AIAVPLTGWL ARRVGEQRLF VASVILFTLT SLLCGLARDL
EVLVACRALQ GLFSGPMVPL SQTILMRAFP PAKRTLALAL WGMTVLLAPI FGPVVGGWLI
DNFSWPWIFL INLPIGLFSF AVCTLMLRPR ASRGEASPID VPGIVLLVIG VGSLQAMLDL
GHDRGWFDSS LITALAIAAG VSLVSLLIWE LGEAHPVVEL SLFRERTFTF CVVIISLGMM
SFSVVGVVFP LWLQAVMGYT AYQAGLATAS MGLLALVFSI LVGVYASRVD ARVLVTFGFG
VFAAVMGWST HFTLSMTFAQ VVTPRLIQGM GLPCFFIPLT AATLSRVADD KLAAASSLSN
FLRTLSAAFG TALSVTWWDN RATYHYAVVS QAVTRASENT QRYVDALHAM GLHGARELSS
LHQVVRQQAY MMATNDMFYM ASVTCVLLAG LMWLTRPKRG AAATMGH