| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1760 |
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| Symbol | pcaH |
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| ID | 4904086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1734616 |
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| End bp | 1735350 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640144866 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001075794 |
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| Protein GI | 126457006 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00117633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAATCA TCAATCTGGA GACGTTTCCG ATGGATTCCT CGACGCTCGC GCCGCGCGAC
TGGCCGTCGC ATCCCGCGTA CATTCATCCG CCGTACCGCT CTTCCGTGAA GCGCGGCCCG
ACGCAGCCGC TGATTCCGCT GAAGGAGACG CTGCGTAACC AGCACGCGCC CGTCTACGGC
GCGGACGATC TCGGCGCGCT CGACCACGAT CTGACGAAGA ACGCGGCGAA GAACGGCGAG
CCGCTCGGCG AGCGGATCGT CGTCACGGGC CGTGTGCTCG ACGAGGGCGG CAAGCCGGTG
CGCGACACGC TCGTCGAGGT CTGGCAGGCG AACGCCGCGG GCCGCTACGT GCACAAGGTC
GACCAGCACG ACGCGCCGCT CGACCCGAAC TTCCTCGGCG CGGGCCGGTG CCTGACCGAC
GCGAACGGCC GCTATCGGTT CCTCACGATC AAGCCGGGCG CGTATCCGTG GGGCAACCAT
CCGAACGCCT GGCGGCCGAA CCATATCCAT TTCTCGTTGT TCGGCGACTA CTTCGGCTCG
CGGCTCGTCA CGCAGATGTA TTTCCCGGGC GATCCGCTCC TCGCGCTCGA CCCGATCTTC
CAGGGCACGC CCGAGGACGC GCGCGAGCGG CTGATCTCGC GCTTCTCGAT CGACACGACC
GAAGAAGGCT TCGCGCTCGG CTACGAATTC GACATCGTGC TGCGCGGCCG CGACGCCACC
CCGATGGAGC GCTGA
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| Protein sequence | MTIINLETFP MDSSTLAPRD WPSHPAYIHP PYRSSVKRGP TQPLIPLKET LRNQHAPVYG
ADDLGALDHD LTKNAAKNGE PLGERIVVTG RVLDEGGKPV RDTLVEVWQA NAAGRYVHKV
DQHDAPLDPN FLGAGRCLTD ANGRYRFLTI KPGAYPWGNH PNAWRPNHIH FSLFGDYFGS
RLVTQMYFPG DPLLALDPIF QGTPEDARER LISRFSIDTT EEGFALGYEF DIVLRGRDAT
PMER
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