Gene BURPS1106A_A1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1601 
Symbol 
ID4904790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand+ 
Start bp1570170 
End bp1570619 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID640144707 
Producttransposase 
Protein accessionYP_001075635 
Protein GI126456767 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.349385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCC GTCTCGACTA CCGCAAGGCG AATCCGCACG CGCTCAACGC GATGCTCGCG 
CTCGAGGAGC GGATCGCGCA AAGCGGGCTG GAGCCGACGC TGATCGAGCT CGTGCGGCTG 
CGCGCCTCGC AGATCAACGG CTGCGCGTAC TGCGTCGACA TGCACACGCG CGACGCGCGC 
AAGCACGGCG AAACCGAGCG CCGCCTCGCG ACGGTCGTCG TCTGGCGCGA AGCGCCGTTC 
TTCACCGACC GCGAACGCGC GGCGCTCGAA TGGACCGAGG CGGTGACGCT CGTCGCGCAC 
GATCACGTGC CCGACGCGGT CTGGGAGGCG GTGCGTCCGC ATTTCACCGA TGCCGAGCTC 
GTCGACCTGA CGCTCGCCAT CGTGACGATC AACGGCTGGA ACCGCTTTGC GGTGTCGTTT 
CGCAAGCTGC CGGCATGCGC TCGAACATGA
 
Protein sequence
MQTRLDYRKA NPHALNAMLA LEERIAQSGL EPTLIELVRL RASQINGCAY CVDMHTRDAR 
KHGETERRLA TVVVWREAPF FTDRERAALE WTEAVTLVAH DHVPDAVWEA VRPHFTDAEL 
VDLTLAIVTI NGWNRFAVSF RKLPACART