Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1453 |
Symbol | |
ID | 4906064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1411887 |
End bp | 1412426 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640144559 |
Product | ProP effector |
Protein accession | YP_001075487 |
Protein GI | 126457353 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.853961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTTG AGCAACTTGC GTCATTGCGC GATCAACTGG CGAAAGCCGC CGCGCAGAAG CGGGCGGCGA AGCAACCGCA GAAGCAACCG CAGAAGCACT CGCAGAAGCG GGACGCCAAG CCGGCGGCTT CGCCGAGCTC GACGGATCCG GTGGTGCTGA CGATCGCGAA ACTCCAGAAG CGGTTTCCGC AGGCGTTCCC GCGCAATCCC GCGCCGAAGG TGCCGCTCAA GGTCGGCATT CTCGAGGACC TGGTGGGGCA GGCGAGCGCG CTGGGTCTGA GCGAAGCGGA ATTGCGCGAC GCGATGCGCA CCTGGTGCCA GGGGAACCGA TACTGGACGT GCCTCGTCGA AGGTGCCGTG CGAATCGACC TGGCGGGCGG CGAAGCGGGG CGGGTATCGG CCGCCGACGC GAAGCGCGCG CGAATGCTGA AAGGGCGCCG CCCGGCGAAG CCGCGCGCGC AACCGTCCAG GCCCGAGCAG GCTGCTCAGC AGCAACAGAC ATCCGCGTGT CCGCCGCAGG GCGCGCAGCG TACCGATTGA
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Protein sequence | MGFEQLASLR DQLAKAAAQK RAAKQPQKQP QKHSQKRDAK PAASPSSTDP VVLTIAKLQK RFPQAFPRNP APKVPLKVGI LEDLVGQASA LGLSEAELRD AMRTWCQGNR YWTCLVEGAV RIDLAGGEAG RVSAADAKRA RMLKGRRPAK PRAQPSRPEQ AAQQQQTSAC PPQGAQRTD
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