Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1439 |
Symbol | irlR |
ID | 4905865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1399491 |
End bp | 1400180 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640144545 |
Product | transcriptional activator IrlR |
Protein accession | YP_001075473 |
Protein GI | 126456086 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATAC TGATCGTGGA AGACGAGCCG AAGACCGGCA TGTATCTGCG CAAGGGGCTG ACCGAAGCGG GCTTCATCGC GGACTGGGTC GAGGACGGCG TGACGGGCCT GCATCAGGCC GAGACCGAGG AGTACGACCT GATCATCCTC GACGTGATGC TGCCCGGCCA CGACGGCTGG ACGGTGCTCG AGCGGCTGCG CCGCGCGCAC TCGACGCCCG TGCTGTTCCT GACCGCGCGC GACGACGTCG GCGACCGCGT GAAGGGGCTC GAGCTCGGCG CGGACGATTA CGTCGTCAAG CCGTTCGATT TCGTCGAGCT GGTCGCGCGC GTGCGCTCGA TCCTGCGCCG CGGGCAGGCG CGCGAATCGA CGGTCCTGCG GATCGCCGAT CTGGAGCTCG ACCTGACGCG GCGCAAGGCC ACGCGCCAGG GCGACGTCGT GCTGCTGACC GCGAAGGAAT TCGCGCTGCT GTGGCTGCTG ATGCGCCGCG AGGGCGAGAT CCTGCCGCGC GCGACGATCG CCTCGCAGGT GTGGGACATG AATTTCAACA GCGACACGAA CGTCGTCGAC GCGGCGATCC GCCGGCTGCG CTCGAAGATC GACGACGCGT ACGAGCCGAA GCTGATCCAC ACGGTGCGCG GGATGGGCTA CGTGCTCGAA GTCAGAAGCG CGAGCGCGCC GAGCCGATGA
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Protein sequence | MRILIVEDEP KTGMYLRKGL TEAGFIADWV EDGVTGLHQA ETEEYDLIIL DVMLPGHDGW TVLERLRRAH STPVLFLTAR DDVGDRVKGL ELGADDYVVK PFDFVELVAR VRSILRRGQA RESTVLRIAD LELDLTRRKA TRQGDVVLLT AKEFALLWLL MRREGEILPR ATIASQVWDM NFNSDTNVVD AAIRRLRSKI DDAYEPKLIH TVRGMGYVLE VRSASAPSR
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