Gene BURPS1106A_A1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1439 
SymbolirlR 
ID4905865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1399491 
End bp1400180 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID640144545 
Producttranscriptional activator IrlR 
Protein accessionYP_001075473 
Protein GI126456086 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATAC TGATCGTGGA AGACGAGCCG AAGACCGGCA TGTATCTGCG CAAGGGGCTG 
ACCGAAGCGG GCTTCATCGC GGACTGGGTC GAGGACGGCG TGACGGGCCT GCATCAGGCC
GAGACCGAGG AGTACGACCT GATCATCCTC GACGTGATGC TGCCCGGCCA CGACGGCTGG
ACGGTGCTCG AGCGGCTGCG CCGCGCGCAC TCGACGCCCG TGCTGTTCCT GACCGCGCGC
GACGACGTCG GCGACCGCGT GAAGGGGCTC GAGCTCGGCG CGGACGATTA CGTCGTCAAG
CCGTTCGATT TCGTCGAGCT GGTCGCGCGC GTGCGCTCGA TCCTGCGCCG CGGGCAGGCG
CGCGAATCGA CGGTCCTGCG GATCGCCGAT CTGGAGCTCG ACCTGACGCG GCGCAAGGCC
ACGCGCCAGG GCGACGTCGT GCTGCTGACC GCGAAGGAAT TCGCGCTGCT GTGGCTGCTG
ATGCGCCGCG AGGGCGAGAT CCTGCCGCGC GCGACGATCG CCTCGCAGGT GTGGGACATG
AATTTCAACA GCGACACGAA CGTCGTCGAC GCGGCGATCC GCCGGCTGCG CTCGAAGATC
GACGACGCGT ACGAGCCGAA GCTGATCCAC ACGGTGCGCG GGATGGGCTA CGTGCTCGAA
GTCAGAAGCG CGAGCGCGCC GAGCCGATGA
 
Protein sequence
MRILIVEDEP KTGMYLRKGL TEAGFIADWV EDGVTGLHQA ETEEYDLIIL DVMLPGHDGW 
TVLERLRRAH STPVLFLTAR DDVGDRVKGL ELGADDYVVK PFDFVELVAR VRSILRRGQA
RESTVLRIAD LELDLTRRKA TRQGDVVLLT AKEFALLWLL MRREGEILPR ATIASQVWDM
NFNSDTNVVD AAIRRLRSKI DDAYEPKLIH TVRGMGYVLE VRSASAPSR