Gene BURPS1106A_A1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1320 
Symbol 
ID4906360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1242922 
End bp1244907 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content64% 
IMG OID640144426 
ProductRhs element Vgr protein 
Protein accessionYP_001075355 
Protein GI126457189 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.249702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGT CCGACATCGC GGGTTTCCTG AGTCTGCAAA ACAGCCGCCT GCTGACGATC 
AAGACGCCGC TTGCCGGGCG CTCCGAGCTG GTGCTCAGCG AGTTCCAGTG CAGCGAGGGC
CTGTCGGTGC TGTTCGACAT GCGGCTGGGG CTCGTGTCGC GCGATCCGAC GATCGAACTG
AAGCAGATGA TCGGGCAGGC CGTCACGATA TCCCTTCAGC CCTCCGGCGC AATCGTCGGC
GGTTCGCCCC GGCATTTTCA CGGTTACGTC ACGCAGTTTT CGCATACCGG CGCCGACGGC
GGGCTCGCCA CCTACAGCGC GACGGTGCAG CCGTGGCTAT GGATGCTGTC GCGACGGGTG
GATTCGCGAA TATTCCAGGA CAAGAGCGCA CGCGACATTC TCGACGCGGT GTTCTCGCAA
TATTCGGCGC TCGCTTCCTA CGAATTCCGC GCCGGCCGCA CGCTCAAGCC GTACAGCTAT
TGCACGCAGT ACCGGGAGAC GGATCTGAAT TTCGTGCTGC GTCTGATGGA GCTGGAAGGG
CTTTTTTTCT ATTTCGAGCA TACGGAGGAC GGACACAAGC TGGTCATCGA CGACGATTCG
ACCCGTGCAA AACCCGTCGA CGGGCCGCCG TCGCTGCGAT ATGCGAGCGG CGAGATTCTC
GAGGACGAAG CGGTGGTCAC GCAATGGGCG GCGCAGCGGC AACTCATGTC CGGCGCGGTC
AGCATGAAGG CTTACGACTA CAAGGTGCCC GCGGCGCGCC GCTACGTGTC GGGCGAAGCC
GATTTCAACC AGGGCGAGGT CGAGCGGTAC GAGATCTATG ACTACGTCGG CCTGCACGGT
TTCGATTCGA CCGACCGGGG CGAGGAACTG GCGAGGTTCA GGCTCGAATC GCTCGCCGCG
AGCGGCAAGA CCTTTTCGGG CACGAGCACC GGCAGGACGC TCGCGTCCGG CCGCTATTTC
GAATTGAGCG CGCATTACGA TCACGACAAC GGACCGATGC AGGACCGCCA GTTCCTGTTG
ACGAACGTCC GCCACCATGG CGTCAACAAT TATCAGTCCA GCGAAGGATC GGGATCGTAC
CACGCGAGCT TCCAGTGCAT CCGCAAGAAG ATTCCGTTCC GGCCGCCGCT CGCGCATGCG
CGGCCCGTCA TTCCGGGGCC GCAGACGGCG ATCGTCGTGG GGCCGAAGGG CGAGCAGATT
CATACCGATG CGCTGGGGCG AGTGAAGATC CAGTTTCATT GGGACCGCAT CGGGCAGCGC
AATCACGGCA GTTCGTGCTG GGTGCGGGTG AGCCAGCCAT GGGCGGGCGG CGGCTTCGGC
TCGGTGCAGA TTCCGCGCAT CGGCGACGAG GTGGTCGTCA CGTTCCTCGA CGGCAATCCC
GATCGTCCGC TGATCATCTC GAGCGTCTAC AACGCGCAGA ACATGCCGCC GTGGGCGCTG
CCGGCGGGCG CGACGCAAAG CGGGTTCCTC ACGCGCTCGC ACAAGGGGAC GGCCGAGAAC
GCCAACGCGA TTCGCTTCGA GGACAAGCTG GGCGAGGAGG AAATCTGGCT GCATGCGGAA
AGGAACCAGC GCATCGAGGT CGAGCACGAC GAATCGCACA GCGTCGGCGC GAAGCGGACC
AAGACGGTCG GCGCGGACGA GATCGTCACG ATCGGCGGCG CGCAGACCCA CACGATCACG
GGGGCGCGCA CGCAGACGAT CGGCGCGGAC CATACGCAGA CCATCAAGGG CGCGCACAAG
CAGAACGTCG CCGGCACGCA TACCCAGGTC ATCGGCGGCA ACGCGTCGAT CACGACCACG
GGGCCGCAGC CGGGCGCCGC CGGCACCGTC GGAGATATCG AGATCCAGTC GAGCCAGGGG
AAGATCCATC TCAAGGCGGC GACGGAAATC ATCATCGAAG TGGGCGCGAG CGTGATCCAC
CTGAAGGCGG ACGGCACGAT CGAGATCAGC GGCCCGACGC ATATCGGGCT GAATTCGAAG
AGCTGA
 
Protein sequence
MKMSDIAGFL SLQNSRLLTI KTPLAGRSEL VLSEFQCSEG LSVLFDMRLG LVSRDPTIEL 
KQMIGQAVTI SLQPSGAIVG GSPRHFHGYV TQFSHTGADG GLATYSATVQ PWLWMLSRRV
DSRIFQDKSA RDILDAVFSQ YSALASYEFR AGRTLKPYSY CTQYRETDLN FVLRLMELEG
LFFYFEHTED GHKLVIDDDS TRAKPVDGPP SLRYASGEIL EDEAVVTQWA AQRQLMSGAV
SMKAYDYKVP AARRYVSGEA DFNQGEVERY EIYDYVGLHG FDSTDRGEEL ARFRLESLAA
SGKTFSGTST GRTLASGRYF ELSAHYDHDN GPMQDRQFLL TNVRHHGVNN YQSSEGSGSY
HASFQCIRKK IPFRPPLAHA RPVIPGPQTA IVVGPKGEQI HTDALGRVKI QFHWDRIGQR
NHGSSCWVRV SQPWAGGGFG SVQIPRIGDE VVVTFLDGNP DRPLIISSVY NAQNMPPWAL
PAGATQSGFL TRSHKGTAEN ANAIRFEDKL GEEEIWLHAE RNQRIEVEHD ESHSVGAKRT
KTVGADEIVT IGGAQTHTIT GARTQTIGAD HTQTIKGAHK QNVAGTHTQV IGGNASITTT
GPQPGAAGTV GDIEIQSSQG KIHLKAATEI IIEVGASVIH LKADGTIEIS GPTHIGLNSK
S