| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1272 |
|---|
| Symbol | |
|---|
| ID | 4904993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 1205772 |
|---|
| End bp | 1206755 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640144378 |
|---|
| Product | aliphatic sulfonate ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_001075307 |
|---|
| Protein GI | 126455702 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.526134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCC CTGCCCGCTG GTTTGCCCGA ACCGTCACCG CCGCACTCGC GTCGCTTTGC
GTCGCCTCCG CGTTCGCGCA GGACGCCGCC GGCGACAAGG TGCTGCGCGT CGGCTATCAG
AAGGCGGGGC TGCTCGCGGT CGTCAAGGCG CAGGGTACGC TCGAGACGCG CGTGAAGCCG
CTCGGCTACA CGGTCAAATG GTTCGAGTTC CCGGCCGGGC CGCAACTGCT CGAAGCGCTG
AACGCGGACA GCGTCGACAT CGGCTACACG GGCGCACCGC CCGCGGTGTT CGCGCAGGCG
AGCGGCGTGC GCTTCGTCTA CGTCGGCGCG GAGCCGCCGT CGCCGCACAA CGAGGCGATC
GTCGTGAAAG CCGATTCGCC GCTCAGGCGC GTCGCCGATC TGCGGGGCAG GAAAGTCGCG
CTGCAGAAAG GCTCGAGCGC GAACTATCTG CTGCTCGAAG CGTTGCGCCA AGCCGGCGTG
CGCTACGACG AGATCCGCCC GATCTACCTG CCGCCCGCCG ACGCGCGCGC CGCGTTCGAG
AGCGGCACCG TCGACGCGTG GGTGGTCTGG GATCCGTACT ACGCGGCCGC GCAGCACGCG
CTGAAGGCAC GCACGCTCGC CGACTACACC GGCTTGTCCG CCACGTACAA CTTCTATGAA
GCGACGCGCG ATTTCGCGAC CCGCCATCCG GACGTCGTCG GCGCGGTACT GCAGCAGTTG
CGCGAGACCG GCCTGTGGGT CAACGCGCAT TCCGCCGAAA CCGCCGCGCT GATCGCGCCG
AAGATCGGCC TCGATCGGGC GCTCGTCGAG ACCTGGGTGA AACGCGTGCC GTACGGCACG
ACGCCGCTCG ACGACAAGAT CGTCGCGTCG CAGCAGCGCG TCGCCGACGC GTTTCTCGCG
GCGAAGCTGA TTCCGCGAAA GCTGACCGTC GCCGACAACG TCTGGACCGA GCGCCGCGCC
GCCGACGCGC TCGCGGCGAA GTAG
|
|---|
| Protein sequence | MIRPARWFAR TVTAALASLC VASAFAQDAA GDKVLRVGYQ KAGLLAVVKA QGTLETRVKP
LGYTVKWFEF PAGPQLLEAL NADSVDIGYT GAPPAVFAQA SGVRFVYVGA EPPSPHNEAI
VVKADSPLRR VADLRGRKVA LQKGSSANYL LLEALRQAGV RYDEIRPIYL PPADARAAFE
SGTVDAWVVW DPYYAAAQHA LKARTLADYT GLSATYNFYE ATRDFATRHP DVVGAVLQQL
RETGLWVNAH SAETAALIAP KIGLDRALVE TWVKRVPYGT TPLDDKIVAS QQRVADAFLA
AKLIPRKLTV ADNVWTERRA ADALAAK
|
|---|
| |