| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1231 |
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| Symbol | |
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| ID | 4903474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1166676 |
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| End bp | 1167974 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640144337 |
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| Product | outer membrane porin |
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| Protein accession | YP_001075266 |
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| Protein GI | 126455983 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCGG ACGAATCGCG GCCGTCGCTT CGATTCGAAA ATTTTATTTT GTTTCCGCTG
ATTTCCGCCC CTATACTCCA TTCCACTAAA GGCACACAGT TCCATATATG GAACACAAAA
AGCCAAAACT CAGCCGTGGG AACGCGCGTG GCCGATCGTT TCGCGCGCGG CCACCGCCCG
CGTCATTTGG AGCAAAGGTC AGGAGATCAG ATGGTCAAGC ATGCGGCAGC AACATTACTC
GGCGCGCTCG CCGTCGCCGG CGCGTGGGCG CAGAGCAGCG TCACGCTGTA CGGCAGCCTC
GATGCCGGCG TCGCGTACGT GAACAACGTC GGCGGCGGCG CGAAGTGGTC GATGATTCAG
GGCAACACGC AGCCCGATCG ATGGGGGCTG AAGGGCGTCG AGGATCTGGG CGGCGGTCTG
AAGGCGATCT TCCAGCTCGA AAACGGCTTC TATACGAACA ACGGCCAGAT GGCGGCGGCG
GGCACGATGT GGAACCGTCA GGCGTTCGTC GGCCTGAATT CCGACCGGCT CGGCGCGCTG
ACGCTCGGCC ACCAGACGCC GTTCAACTTC GACTGGCTCG ACCCGCTGTC GAGCGCATTC
CTCGCGCAGA GCTGGTATGC GTTCCATCCC GGCAACCTCG ACCAGCTCGC GGACACCAGC
ACCGTGCCGT TCAACAACTC GGTCAAGTAC CGGTCACCCG TCTTTGCGGG CTTCACGGTG
GGCGCGATGC TCGGCTTCGG CAACACGACG AACTTCTCGA CCGGCCGCAC GATGAGCTTC
GGCGTGAACT ACGCGAACGG CCCGTTCAAG GCGGCCGCCG TCTATTCGAA CGAGCACGAC
CAGGCGTTCC CGATGGCGAC CGTCGGCGGC ATCGCCGGGC CGGGCGGCAC GTTCCAGGGC
ATGCCCGTCG CGAGCTATGT CGCGAAGAAG GCGCAGAACA TGGGCGCGGG CCTGTCGTAC
CGCTTCGGCC CGCTGCTCGT GCACGGCCTT TACACGCGCG TGAAACTGCA GGCGAACGGC
CACTCGGATA CGTTCCAGAG CTACGACGCC GGCGCGAACT ACCAGAGCTC GCCGTTCAAC
GTGATCGCGG GCGGCGCGGC GACTTCGACG CTCGCCGGCC GCCGCTGGAG CCAGTTCGAG
CTCGGCGACA CGTATTCGCT GTCCAAGCGC ACGCAGCTCT ACGTGAACGT GCTGTACGAG
CACGCGAGCG GCAACGCGAA GGCCGCGTTC TTCACGGCGG GCGCGTCGAG CACGGCGAAT
CAGGTGATTG TCCTGACGGG GATTCACCAC TCGTTCTGA
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| Protein sequence | MSSDESRPSL RFENFILFPL ISAPILHSTK GTQFHIWNTK SQNSAVGTRV ADRFARGHRP
RHLEQRSGDQ MVKHAAATLL GALAVAGAWA QSSVTLYGSL DAGVAYVNNV GGGAKWSMIQ
GNTQPDRWGL KGVEDLGGGL KAIFQLENGF YTNNGQMAAA GTMWNRQAFV GLNSDRLGAL
TLGHQTPFNF DWLDPLSSAF LAQSWYAFHP GNLDQLADTS TVPFNNSVKY RSPVFAGFTV
GAMLGFGNTT NFSTGRTMSF GVNYANGPFK AAAVYSNEHD QAFPMATVGG IAGPGGTFQG
MPVASYVAKK AQNMGAGLSY RFGPLLVHGL YTRVKLQANG HSDTFQSYDA GANYQSSPFN
VIAGGAATST LAGRRWSQFE LGDTYSLSKR TQLYVNVLYE HASGNAKAAF FTAGASSTAN
QVIVLTGIHH SF
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