Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1221 |
Symbol | bpsI |
ID | 4903646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1159221 |
End bp | 1159832 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640144327 |
Product | autoinducer synthase BpsI |
Protein accession | YP_001075256 |
Protein GI | 126457870 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.653596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAACTT TCGTTCATGG CGACGGGCGC CTGCCGAGCG ACTTGGCGGC TGATCTGGGC CTTTATCGGC ACCGAGTTTT CGTCGAGCAG CTCGGCTGGA AACTGCCGTC GGCAAGCGAA GGGTTCGAGC GGGATCAGTA CGATCGCGAC GATACCGTCT ATGTGTTCGC CCGCGACGAC GACGGGGAAA TCTGCGGCTG CGCCCGGCTG CTGCCGACGA CCCGCCCGTA TCTGCTGAAG GAACTGTTCC CGACGCTGGT CGCGCAAGAC ATGCCGTTGC CGCAATCCGC CGCCGTCTGG GAATTGTCGC GCTTCGCCGC GAACGCCGAG GATCCGGCCG GGGGCGGCAA CCCGGCCTGG GCGGTGCGGC CGATGCTCGC CGCCGTCGTC GAGTGCGCCG CGCGGCTTGG CGCGAAGCAA CTGATCGGCG TGACGTTTCT GAGCATGGAG CGCCTGTTCC GCCGGATCGG CGTGCACGCG CACCGGGCGG GGCCCGCGCA GCAGATCGAC GGGCGCATGG TCGTCGCGTG CTGGATCGAC CTCGACGCGC AAACGCTCGC CGCGCTCGAT CTCGACCCGC TGCTGTGCGC GCCGCCCGCC GAAGCCGCCT GA
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Protein sequence | MRTFVHGDGR LPSDLAADLG LYRHRVFVEQ LGWKLPSASE GFERDQYDRD DTVYVFARDD DGEICGCARL LPTTRPYLLK ELFPTLVAQD MPLPQSAAVW ELSRFAANAE DPAGGGNPAW AVRPMLAAVV ECAARLGAKQ LIGVTFLSME RLFRRIGVHA HRAGPAQQID GRMVVACWID LDAQTLAALD LDPLLCAPPA EAA
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