Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1154 |
Symbol | |
ID | 4905080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1103387 |
End bp | 1104034 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640144260 |
Product | LuxR family DNA-binding response regulator |
Protein accession | YP_001075189 |
Protein GI | 126457808 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.324728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAAGG TTCTGATTGC CGACGACCAC GCGCTCGTGC GCGACGGTCT GCGCCATATC CTGCAGAATG CGTCCGGCTA TGAAGTCGCC GGTGAAGCGT TCGACAGCGC GACGACGATC GCGCTCGTGC GCTCGACGCC CGCCCAAGTG CTCGTGCTCG ATCTGTCGAT GCCGGGCCGC AACGGCGTCG AGCTGATCAA GCAGATCAAG GAGGAGAAGC CCGCGCTGCG GATCCTGGTG CTGACGATGC ATGCGGAGCA GCAGTACGCG GTGCGCGCGT TCCGCGCGGG CGCCTCCGGC TATCTGACGA AGGAGAGCGC GAGCTCGGAG CTCGTCGGCG CGGTGACGAA GGTCGCCTCG GGCGGCGTCT ACGTGAGCCT CGCGATGGCC GAGCGCTTCG CGCAGAGCCT GAACGAGCCG GCGGAGACGC TGCCGCACCA CCGGCTGTCG GACCGCGAGT TCGACGTGTT CCGCCGGATC GCCTCCGGCC AGACGCTCAC GCAGATCGCC GACGAGCTGT GCGTGAGCGC GAAGACGGTC AGCACGTACA AGACGCGGAT TCTCGAGAAG ATGCAGATGC CGCACGAAGC GGCGCTCGTG CGCTACGCGT TGCGGCACAA GCTGATCGAC GATCCGGACG AGGATTGA
|
Protein sequence | MIKVLIADDH ALVRDGLRHI LQNASGYEVA GEAFDSATTI ALVRSTPAQV LVLDLSMPGR NGVELIKQIK EEKPALRILV LTMHAEQQYA VRAFRAGASG YLTKESASSE LVGAVTKVAS GGVYVSLAMA ERFAQSLNEP AETLPHHRLS DREFDVFRRI ASGQTLTQIA DELCVSAKTV STYKTRILEK MQMPHEAALV RYALRHKLID DPDED
|
| |