| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0947 |
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| Symbol | |
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| ID | 4904412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 922772 |
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| End bp | 923863 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640144053 |
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| Product | outer membrane porin |
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| Protein accession | YP_001074983 |
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| Protein GI | 126458389 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.651765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC ATCGCCGCCT TGCCGGCACG ACTGCGATCT CAGCGAGCCT CGCCGCGTGC
GCGGGCCTCG CGTCCGGCCA CGCGCTCGCG CAATCGAGCG TCACGCTGTA CGGGATCATG
GACGCGGGCA TCGAATACGT GAACCACGCG GCGCCCGACG GCGGCGGCGC GTTCCGGATG
AAATCGGGCA ACAAGAACAC TTCGCGCTGG GGTCTGCGCG GCGTCGAGGA TCTCGGCGGC
GGGCTGAAGG CGGTGTTCCG GCTCGAAAGC GGGATCGATC TCGCGAACGG CGCGTTCGAC
GACGGCCCCG ACTCGATCTT CGCGCGGCGC GCGACGGTCG GCCTCAAGGG CCAGTGGGGC
GAGCTCACGC TCGGGCGCAA CTTCACGCCC ACGTACGACT ACATGCTGCC GTTCGACCCG
ATGGGCTACG CGCAGAACTA TTCGTGGGCG ACGTCCTCGA CGGCCACGGG CGGCCGCAAG
GACGGCCTCT TCACGCGCTC GTCGAACGCG GTGCGCTACG ACGGCGCGTA CGGCGGCCTG
CGCTTCGGCG CGATGTACGG CTTCGGCAAC GTGCCGGGCA GCATGAAGAC GAGCTCGAAA
TACGATTTCG CGCTCGGCTA CGAGAGCGGC CCGTTTGCCG CGGTCGTCAC GTTCGACCGC
CAGAACGGCG CGGCCGACAG CGTGACCCCG GCGGACCCCG TCAATTACGT GCAGGGCATT
CACGCGGGCG TCAGCTACGA CTTCGGCCGC CTGAAGACGA TGGCGGGCTA CCGCAACTAC
CGCCGCACGT ATCACACGGC GGCGGCGACG CAATTGAGCG ACATGTACTG GCTCGGCGGC
TCGTACGACT TCACGCCGGC GTTCTCGCTG ACGGGCGCGC TCTACCACCA GAACATCAAG
GGCGGCACCG ACGCCGATCC GACGCTCGTG TCGCTGCGCG CGCAATACGC GCTGTCCAAG
CGCACGGTGC TGTACGCGGC GGGCGGCTTC GCGATCGCCA AGCACGGGCA GAACGTCAGC
GTGTCGCGCG ACTCGGTCGG ATACGCGGAT ACGCAGCTCG GCGTGACCGT CGGGATGCAG
CAGCGGTTCT GA
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| Protein sequence | MKKHRRLAGT TAISASLAAC AGLASGHALA QSSVTLYGIM DAGIEYVNHA APDGGGAFRM
KSGNKNTSRW GLRGVEDLGG GLKAVFRLES GIDLANGAFD DGPDSIFARR ATVGLKGQWG
ELTLGRNFTP TYDYMLPFDP MGYAQNYSWA TSSTATGGRK DGLFTRSSNA VRYDGAYGGL
RFGAMYGFGN VPGSMKTSSK YDFALGYESG PFAAVVTFDR QNGAADSVTP ADPVNYVQGI
HAGVSYDFGR LKTMAGYRNY RRTYHTAAAT QLSDMYWLGG SYDFTPAFSL TGALYHQNIK
GGTDADPTLV SLRAQYALSK RTVLYAAGGF AIAKHGQNVS VSRDSVGYAD TQLGVTVGMQ
QRF
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