Gene BURPS1106A_A0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0835 
Symbol 
ID4904834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp832401 
End bp834362 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content69% 
IMG OID640143941 
Productmacrolide-specific ABC-type efflux carrier 
Protein accessionYP_001074871 
Protein GI126458054 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.077145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGGC CGCTGCTTCA GCTCACGCGC GTCACGCGCC GCTTTCCGGC GGGCGAGAAG 
GACGTCGTCG TGCTCGACGA CGTGAGCCTG TCGATCGACG CGGGCGAGAT CGTCGCCATC
GTCGGCGCGT CCGGCTCGGG CAAGTCCACG CTGATGAACA TCCTCGGCTG CCTCGACCAT
CCGAGCTCGG GCAGCTACAC CGTCGGCGGG CGCGAGACGA GCGAGCTCGA AAGCGACGAG
CTCGCGCGCC TGCGCCGCGA GCATTTCGGC TTCATCTTCC AGCGCTATCA CCTGCTGCCG
CACCTGTGCG CGGCCGAGAA CGTCGAAATG CCCGCCGTCT ACGCGGGCAG CGCGCAGGCG
CAGCGGCGCG AGCGCGCGCT CGCGCTGCTC GCGCGTCTCG GCCTGTCCGA TCGCGCGAGC
CACCGGCCGA GCCAATTGTC GGGCGGCCAG CAGCAGCGCG TGAGCATCGC GCGCGCGCTG
ATGAACGGCG GCGAGGTGAT CCTCGCCGAC GAGCCGACGG GCGCGCTCGA TTCGAAGAGC
GGCCGCGACG TGATCCGCGT GCTGCGCGAG CTGAACGCGC TCGGCCATAC GGTCATCATC
GTCACGCACG ACGAGCAAGT CGCCGCGCAT GCGCGCCGCA TCATCGAGAT CAGCGACGGC
CGCATCGTCG GCGACCGCCT CAATCCGCAC GCGGACGCGG CCGATGCCGC GCCCGACGCG
AGCGGCGGCG CGCAGCCGCG GCGCGCGCGC CGGCTGTCGG CGGGCGTCGG CCGCTTCGCG
GAAGCGTTCC GGATGGCGTG GATCGCGCTC GTGTCGCACC GGCTGCGCAC GCTGCTCACG
ATGCTCGGGA TCATCATCGG GATCACGTCG GTCGTGTCGA TCGTCGCGAT CGGCGAAGGC
GCGAAGCGCT ACATGCTCGA CGAAATCGGC AGCATCGGCA CCAACACGAT CAACGTGTAC
CCGGGCGCCG ACTGGGGCGA CAGCCGCGCG GACGCGATCC AGACGCTCGT GGCCGCCGAC
GCCGCCGCGC TCGCCGAGCA GATCTACATC GACAGCGCGA CGCCCGAGAC GTCGCGCAGC
CTGCTGCTGC GCTATCGGAA CGTCGATGTC AACGCGCTCG TGAGCGGCGT CGGCGAGCGC
TTCTTCCAGG TGCGGGGGAT GAAGCTCGCG CAAGGCATCG CGTTCGGCGC CGACGAGGTG
CGCCGCCAGG CGCAAGTCGC GGTGATCGAC GAGAACACGC GCCGCAAGCT GTTCGGCGCG
AATCCGAACC CGCTCGGCGA AGTGATCCTG ATCGACAATC TGCCGTGCGT CGTGATCGGC
GTGACCGCGA GCAAGAAGAG CGCGTTCGGC GACATGAAGA ACCTGAACGT CTGGGTGCCG
TACACGACGG CGTCCGGGCG CCTGTTCGGC CAGCGGCATC TCGACAGCAT CACCGTGCGC
GTGCGTGACG GCCAGCCGAG CGACGCGGCC GAACGGAGCC TCACGAAGCT GATGCTGCAG
CGGCACGGCC GCAAGGATTT CTTCACGTAC AACATGGACA GCGTCGTCAA GACGGTCGAG
AAGACCGGGC AGTCGCTCAC GCTGCTGCTG TCGCTGATCG CGGTGATCTC GCTCGTCGTC
GGCGGGATCG GCGTGATGAA CATCATGCTC GTGTCGGTGA CCGAGCGCAC GCGCGAGATC
GGCATCCGGA TGGCGGTCGG CGCGCGGCAG ACCGACATCA TGCAGCAGTT TCTCGTCGAA
GCCGTGACCG TCTGCCTGAT GGGCGGCGCG ATCGGCATCG TGCTGTCGTT CGGCATGAGT
TTCGTGTTCT CGCTGTTCGT CGACCAATGG AAAATGGTGT TCTCCGCCGC CTCGATCGCA
TCGGCGTTCC TGTGCTCGAC GCTGATCGGC GTCGTGTTCG GCTTCATGCC CGCGCGCAAC
GCGTCGCGGC TCGATCCGAT CGATGCGCTC GCGCGCGATT GA
 
Protein sequence
MTGPLLQLTR VTRRFPAGEK DVVVLDDVSL SIDAGEIVAI VGASGSGKST LMNILGCLDH 
PSSGSYTVGG RETSELESDE LARLRREHFG FIFQRYHLLP HLCAAENVEM PAVYAGSAQA
QRRERALALL ARLGLSDRAS HRPSQLSGGQ QQRVSIARAL MNGGEVILAD EPTGALDSKS
GRDVIRVLRE LNALGHTVII VTHDEQVAAH ARRIIEISDG RIVGDRLNPH ADAADAAPDA
SGGAQPRRAR RLSAGVGRFA EAFRMAWIAL VSHRLRTLLT MLGIIIGITS VVSIVAIGEG
AKRYMLDEIG SIGTNTINVY PGADWGDSRA DAIQTLVAAD AAALAEQIYI DSATPETSRS
LLLRYRNVDV NALVSGVGER FFQVRGMKLA QGIAFGADEV RRQAQVAVID ENTRRKLFGA
NPNPLGEVIL IDNLPCVVIG VTASKKSAFG DMKNLNVWVP YTTASGRLFG QRHLDSITVR
VRDGQPSDAA ERSLTKLMLQ RHGRKDFFTY NMDSVVKTVE KTGQSLTLLL SLIAVISLVV
GGIGVMNIML VSVTERTREI GIRMAVGARQ TDIMQQFLVE AVTVCLMGGA IGIVLSFGMS
FVFSLFVDQW KMVFSAASIA SAFLCSTLIG VVFGFMPARN ASRLDPIDAL ARD